IDTG_CLAPA
ID IDTG_CLAPA Reviewed; 334 AA.
AC J7FIX8;
DT 02-DEC-2020, integrated into UniProtKB/Swiss-Prot.
DT 31-OCT-2012, sequence version 1.
DT 03-AUG-2022, entry version 22.
DE RecName: Full=Geranylgeranyl pyrophosphate synthase idtG {ECO:0000303|PubMed:23468653};
DE Short=GGPP synthase {ECO:0000305};
DE Short=GGPPSase {ECO:0000305};
DE EC=2.5.1.- {ECO:0000305|PubMed:29457197};
DE AltName: Full=(2E,6E)-farnesyl diphosphate synthase {ECO:0000250|UniProtKB:Q12051};
DE AltName: Full=Dimethylallyltranstransferase {ECO:0000250|UniProtKB:Q12051};
DE EC=2.5.1.1 {ECO:0000250|UniProtKB:Q12051};
DE AltName: Full=Farnesyl diphosphate synthase {ECO:0000250|UniProtKB:Q12051};
DE AltName: Full=Farnesyltranstransferase {ECO:0000250|UniProtKB:Q12051};
DE EC=2.5.1.29 {ECO:0000250|UniProtKB:Q12051};
DE AltName: Full=Geranylgeranyl diphosphate synthase {ECO:0000250|UniProtKB:Q12051};
DE AltName: Full=Geranyltranstransferase {ECO:0000250|UniProtKB:Q12051};
DE EC=2.5.1.10 {ECO:0000250|UniProtKB:Q12051};
DE AltName: Full=Indole-diterpene biosynthesis cluster protein G {ECO:0000303|PubMed:23468653};
GN Name=idtG {ECO:0000303|PubMed:23468653};
OS Claviceps paspali (Rye ergot fungus).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes;
OC Hypocreomycetidae; Hypocreales; Clavicipitaceae; Claviceps.
OX NCBI_TaxID=40601;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], IDENTIFICATION, AND FUNCTION.
RC STRAIN=RRC-1481;
RX PubMed=23468653; DOI=10.1371/journal.pgen.1003323;
RA Schardl C.L., Young C.A., Hesse U., Amyotte S.G., Andreeva K., Calie P.J.,
RA Fleetwood D.J., Haws D.C., Moore N., Oeser B., Panaccione D.G.,
RA Schweri K.K., Voisey C.R., Farman M.L., Jaromczyk J.W., Roe B.A.,
RA O'Sullivan D.M., Scott B., Tudzynski P., An Z., Arnaoudova E.G.,
RA Bullock C.T., Charlton N.D., Chen L., Cox M., Dinkins R.D., Florea S.,
RA Glenn A.E., Gordon A., Gueldener U., Harris D.R., Hollin W., Jaromczyk J.,
RA Johnson R.D., Khan A.K., Leistner E., Leuchtmann A., Li C., Liu J., Liu J.,
RA Liu M., Mace W., Machado C., Nagabhyru P., Pan J., Schmid J., Sugawara K.,
RA Steiner U., Takach J.E., Tanaka E., Webb J.S., Wilson E.V., Wiseman J.L.,
RA Yoshida R., Zeng Z.;
RT "Plant-symbiotic fungi as chemical engineers: Multi-genome analysis of the
RT Clavicipitaceae reveals dynamics of alkaloid loci.";
RL PLoS Genet. 9:E1003323-E1003323(2013).
RN [2]
RP FUNCTION, DISRUPTION PHENOTYPE, AND PATHWAY.
RX PubMed=29457197; DOI=10.1007/s00253-018-8807-x;
RA Kozak L., Szilagyi Z., Vago B., Kakuk A., Toth L., Molnar I., Pocsi I.;
RT "Inactivation of the indole-diterpene biosynthetic gene cluster of
RT Claviceps paspali by Agrobacterium-mediated gene replacement.";
RL Appl. Microbiol. Biotechnol. 102:3255-3266(2018).
RN [3]
RP FUNCTION.
RX PubMed=32077051; DOI=10.1007/s12223-020-00777-6;
RA Kozak L., Szilagyi Z., Toth L., Pocsi I., Molnar I.;
RT "Functional characterization of the idtF and idtP genes in the Claviceps
RT paspali indole diterpene biosynthetic gene cluster.";
RL Folia Microbiol. (Praha) 65:605-613(2020).
CC -!- FUNCTION: Geranylgeranyl pyrophosphate synthase; part of the gene
CC cluster that mediates the biosynthesis of paspalitrems, indole-
CC diterpene (IDT) mycotoxins that are potent tremorgens in mammals
CC (PubMed:23468653, PubMed:29457197, PubMed:32077051). The geranylgeranyl
CC diphosphate (GGPP) synthase idtG is proposed to catalyze the first step
CC in IDT biosynthesis via catalysis of a series of iterative
CC condensations of isopentenyl diphosphate (IPP) with dimethylallyl
CC diphosphate (DMAPP), geranyl diphosphate (GPP), and farnesyl
CC diphosphate (FPP), to form GGPP (Probable). Condensation of indole-3-
CC glycerol phosphate with GGPP by the prenyltransferase idtC then forms
CC 3-geranylgeranylindole (3-GGI) (Probable). Epoxidation of the two
CC terminal alkenes of the geranylgeranyl moiety by the FAD-dependent
CC monooxygenase idtM, and cyclization by the terpene cyclase idtB then
CC leads to the production of paspaline (Probable). The cytochrome P450
CC monooxygenase idtP then catalyzes oxidative elimination of the pendant
CC methyl group at C-12 of paspaline and generates the C-10 ketone to
CC yield 13-desoxypaxilline (PubMed:32077051). The cytochrome P450
CC monooxygenase idtQ may catalyze the C-13 oxidation of 13-
CC desoxypaxilline to afford paxilline (Probable). Considering that both
CC paspalicine and paxilline were detected in C.paspali, idtQ also
CC catalyzes the formation of paspalinine from 13-desoxypaxilline via
CC paspalicine as an intermediate (Probable). Finally, the alpha-
CC prenyltransferase idtF prenylates paspalinine at the C-20 or the C-21
CC positions to yield paspalitrems A and C, respectively
CC (PubMed:32077051). The hydroxylation of paspalitrem A at C-32 by a
CC still unknown oxidase affords paspalitrem B (Probable).
CC {ECO:0000269|PubMed:23468653, ECO:0000269|PubMed:29457197,
CC ECO:0000269|PubMed:32077051, ECO:0000305|PubMed:29457197}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=dimethylallyl diphosphate + isopentenyl diphosphate = (2E)-
CC geranyl diphosphate + diphosphate; Xref=Rhea:RHEA:22408,
CC ChEBI:CHEBI:33019, ChEBI:CHEBI:57623, ChEBI:CHEBI:58057,
CC ChEBI:CHEBI:128769; EC=2.5.1.1;
CC Evidence={ECO:0000250|UniProtKB:Q12051};
CC -!- CATALYTIC ACTIVITY:
CC Reaction=(2E)-geranyl diphosphate + isopentenyl diphosphate = (2E,6E)-
CC farnesyl diphosphate + diphosphate; Xref=Rhea:RHEA:19361,
CC ChEBI:CHEBI:33019, ChEBI:CHEBI:58057, ChEBI:CHEBI:128769,
CC ChEBI:CHEBI:175763; EC=2.5.1.10;
CC Evidence={ECO:0000250|UniProtKB:Q12051};
CC -!- CATALYTIC ACTIVITY:
CC Reaction=(2E,6E)-farnesyl diphosphate + isopentenyl diphosphate =
CC (2E,6E,10E)-geranylgeranyl diphosphate + diphosphate;
CC Xref=Rhea:RHEA:17653, ChEBI:CHEBI:33019, ChEBI:CHEBI:58756,
CC ChEBI:CHEBI:128769, ChEBI:CHEBI:175763; EC=2.5.1.29;
CC Evidence={ECO:0000250|UniProtKB:Q12051};
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000250|UniProtKB:Q12051};
CC Note=Binds 3 Mg(2+) ions per subunit. {ECO:0000250|UniProtKB:Q12051};
CC -!- PATHWAY: Secondary metabolite biosynthesis.
CC {ECO:0000269|PubMed:29457197}.
CC -!- DISRUPTION PHENOTYPE: Simultaneous disruption of idtB, idtC, idtF and
CC idtG eliminates the biosynthesis of the whole spectrum of indole-
CC diterpenes reported to be produced by C.paspali, including paspaline,
CC paxilline, paspalinine, paspalitrem A and paspalitrem B.
CC {ECO:0000269|PubMed:29457197}.
CC -!- SIMILARITY: Belongs to the FPP/GGPP synthase family. {ECO:0000305}.
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DR EMBL; JN613321; AFO85420.1; -; Genomic_DNA.
DR AlphaFoldDB; J7FIX8; -.
DR SMR; J7FIX8; -.
DR GO; GO:0004161; F:dimethylallyltranstransferase activity; IEA:UniProtKB-EC.
DR GO; GO:0004311; F:farnesyltranstransferase activity; IEA:UniProtKB-EC.
DR GO; GO:0004337; F:geranyltranstransferase activity; IEA:UniProtKB-EC.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0008299; P:isoprenoid biosynthetic process; IEA:InterPro.
DR CDD; cd00685; Trans_IPPS_HT; 1.
DR Gene3D; 1.10.600.10; -; 1.
DR InterPro; IPR008949; Isoprenoid_synthase_dom_sf.
DR InterPro; IPR000092; Polyprenyl_synt.
DR InterPro; IPR033749; Polyprenyl_synt_CS.
DR Pfam; PF00348; polyprenyl_synt; 1.
DR SUPFAM; SSF48576; SSF48576; 1.
DR PROSITE; PS00723; POLYPRENYL_SYNTHASE_1; 1.
DR PROSITE; PS00444; POLYPRENYL_SYNTHASE_2; 1.
PE 3: Inferred from homology;
KW Magnesium; Metal-binding; Transferase.
FT CHAIN 1..334
FT /note="Geranylgeranyl pyrophosphate synthase idtG"
FT /id="PRO_0000451434"
FT BINDING 49
FT /ligand="isopentenyl diphosphate"
FT /ligand_id="ChEBI:CHEBI:128769"
FT /evidence="ECO:0000250|UniProtKB:Q12051"
FT BINDING 52
FT /ligand="isopentenyl diphosphate"
FT /ligand_id="ChEBI:CHEBI:128769"
FT /evidence="ECO:0000250|UniProtKB:Q12051"
FT BINDING 81
FT /ligand="isopentenyl diphosphate"
FT /ligand_id="ChEBI:CHEBI:128769"
FT /evidence="ECO:0000250|UniProtKB:Q12051"
FT BINDING 88
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="1"
FT /evidence="ECO:0000250|UniProtKB:Q12051"
FT BINDING 88
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="2"
FT /evidence="ECO:0000250|UniProtKB:Q12051"
FT BINDING 92
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="1"
FT /evidence="ECO:0000250|UniProtKB:Q12051"
FT BINDING 92
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="2"
FT /evidence="ECO:0000250|UniProtKB:Q12051"
FT BINDING 97
FT /ligand="dimethylallyl diphosphate"
FT /ligand_id="ChEBI:CHEBI:57623"
FT /evidence="ECO:0000250|UniProtKB:Q12051"
FT BINDING 98
FT /ligand="isopentenyl diphosphate"
FT /ligand_id="ChEBI:CHEBI:128769"
FT /evidence="ECO:0000250|UniProtKB:Q12051"
FT BINDING 175
FT /ligand="dimethylallyl diphosphate"
FT /ligand_id="ChEBI:CHEBI:57623"
FT /evidence="ECO:0000250|UniProtKB:Q12051"
FT BINDING 176
FT /ligand="dimethylallyl diphosphate"
FT /ligand_id="ChEBI:CHEBI:57623"
FT /evidence="ECO:0000250|UniProtKB:Q12051"
FT BINDING 209
FT /ligand="dimethylallyl diphosphate"
FT /ligand_id="ChEBI:CHEBI:57623"
FT /evidence="ECO:0000250|UniProtKB:Q12051"
FT BINDING 212
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="3"
FT /evidence="ECO:0000250|UniProtKB:Q12051"
FT BINDING 216
FT /ligand="dimethylallyl diphosphate"
FT /ligand_id="ChEBI:CHEBI:57623"
FT /evidence="ECO:0000250|UniProtKB:Q12051"
FT BINDING 226
FT /ligand="dimethylallyl diphosphate"
FT /ligand_id="ChEBI:CHEBI:57623"
FT /evidence="ECO:0000250|UniProtKB:Q12051"
FT BINDING 236
FT /ligand="dimethylallyl diphosphate"
FT /ligand_id="ChEBI:CHEBI:57623"
FT /evidence="ECO:0000250|UniProtKB:Q12051"
FT SITE 120
FT /note="Important for determining product chain length"
FT /evidence="ECO:0000250|UniProtKB:Q12051"
SQ SEQUENCE 334 AA; 37624 MW; 6EF0331EE1273942 CRC64;
MAPSPIMPRY HVGPMASTRR AISKKGFPRT RSFPVLTAPL DYLRDSPGKD IRSGLTDAFN
EFLCVPEDKV VTIKRIIDLL HNASLLIDDI QDDSKLRRGV PVAHSIFGIA QTINSANLAY
FLAQQELKKL SNPDAFAIYT DELINLHRGQ GMELHWRESL HCPTEEEYMR MVQNKTGGLF
RLAIRLLQGE SRSDRDYVPL VDTLGTLFQI RDDYQNLQSD VYSKNKGFCE DISEGKFSYP
VIHSIRARPG DLRLLNILKQ RSEDLMVKQY AVSYINSTGS FEFCRGKIDC LAQWANLQLA
ALEEAEGAGR GDKLRAVLRL LDMKASGKQA DVAS
