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IE1_NPVAC
ID   IE1_NPVAC               Reviewed;         582 AA.
AC   P11138; Q9WIA6;
DT   01-JUL-1989, integrated into UniProtKB/Swiss-Prot.
DT   01-NOV-1995, sequence version 3.
DT   23-FEB-2022, entry version 84.
DE   RecName: Full=Trans-activating transcriptional regulatory protein;
DE   AltName: Full=Immediate early protein 1;
DE            Short=IE-1;
GN   Name=IE1;
OS   Autographa californica nuclear polyhedrosis virus (AcMNPV).
OC   Viruses; Naldaviricetes; Lefavirales; Baculoviridae; Alphabaculovirus.
OX   NCBI_TaxID=46015;
OH   NCBI_TaxID=7088; Lepidoptera (butterflies and moths).
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX   PubMed=3043024; DOI=10.1128/jvi.62.9.3193-3200.1988;
RA   Chisholm G.E., Henner D.J.;
RT   "Multiple early transcripts and splicing of the Autographa californica
RT   nuclear polyhedrosis virus IE-1 gene.";
RL   J. Virol. 62:3193-3200(1988).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC   STRAIN=E2;
RX   PubMed=16789264; DOI=10.1128/jvi.61.7.2091-2099.1987;
RA   Guarino L.A., Summers M.D.;
RT   "Nucleotide sequence and temporal expression of a baculovirus regulatory
RT   gene.";
RL   J. Virol. 61:2091-2099(1987).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=C6;
RX   PubMed=8030224; DOI=10.1006/viro.1994.1380;
RA   Ayres M.D., Howard S.C., Kuzio J., Lopez-Ferber M., Possee R.D.;
RT   "The complete DNA sequence of Autographa californica nuclear polyhedrosis
RT   virus.";
RL   Virology 202:586-605(1994).
RN   [4]
RP   FUNCTION.
RX   PubMed=10936100; DOI=10.1006/viro.2000.0452;
RA   Leisy D.J., Rohrmann G.F.;
RT   "The Autographa californica nucleopolyhedrovirus IE-1 protein complex has
RT   two modes of specific DNA binding.";
RL   Virology 274:196-202(2000).
RN   [5]
RP   SUBCELLULAR LOCATION, AND SUBUNIT.
RX   PubMed=12186932; DOI=10.1128/jvi.76.18.9505-9515.2002;
RA   Olson V.A., Wetter J.A., Friesen P.D.;
RT   "Baculovirus transregulator IE1 requires a dimeric nuclear localization
RT   element for nuclear import and promoter activation.";
RL   J. Virol. 76:9505-9515(2002).
RN   [6]
RP   INTERACTION WITH LEF-3 AND HELI.
RX   PubMed=15518813; DOI=10.1016/j.virol.2004.08.035;
RA   Ito E., Sahri D., Knippers R., Carstens E.B.;
RT   "Baculovirus proteins IE-1, LEF-3, and P143 interact with DNA in vivo: a
RT   formaldehyde cross-linking study.";
RL   Virology 329:337-347(2004).
RN   [7]
RP   FUNCTION.
RX   PubMed=20705310; DOI=10.1016/j.virol.2010.07.020;
RA   Efrose R., Swevers L., Iatrou K.;
RT   "Baculoviruses deficient in ie1 gene function abrogate viral gene
RT   expression in transduced mammalian cells.";
RL   Virology 406:293-301(2010).
RN   [8]
RP   REGION, FUNCTION, PHOSPHORYLATION, AND MUTAGENESIS OF THR-15.
RX   PubMed=22496221; DOI=10.1128/jvi.00373-12;
RA   Taggart D.J., Mitchell J.K., Friesen P.D.;
RT   "A conserved N-terminal domain mediates required DNA replication activities
RT   and phosphorylation of the transcriptional activator IE1 of Autographa
RT   californica multicapsid nucleopolyhedrovirus.";
RL   J. Virol. 86:6575-6585(2012).
CC   -!- FUNCTION: Regulatory transcriptional protein, which trans-activates
CC       gene expression from early baculovirus promoters. Can also trans-
CC       activate its own promoter, suggesting an autoregulation during
CC       infection of host cells. Promotes also viral DNA genome replication via
CC       the N-terminal region. {ECO:0000269|PubMed:10936100,
CC       ECO:0000269|PubMed:20705310, ECO:0000269|PubMed:22496221}.
CC   -!- SUBUNIT: Homodimer. Interacts with helicase and LEF-3.
CC       {ECO:0000269|PubMed:12186932}.
CC   -!- SUBCELLULAR LOCATION: Host nucleus {ECO:0000269|PubMed:12186932}.
CC   -!- ALTERNATIVE PRODUCTS:
CC       Event=Alternative splicing; Named isoforms=2;
CC         Comment=The spliced form of IE-1 was expressed only in the first 6
CC         hours postinfection, whereas the nonspliced IE-1 transcript was
CC         expressed at constant level up to 24 hours.;
CC       Name=Short;
CC         IsoId=P11138-1; Sequence=Displayed;
CC       Name=Long;
CC         IsoId=P11138-2; Sequence=Not described;
CC   -!- DOMAIN: The N-terminal region is required for origin-specific DNA
CC       replication and phosphorylation. {ECO:0000269|PubMed:22496221}.
CC   -!- PTM: Phosphorylated. {ECO:0000269|PubMed:22496221}.
CC   -!- MISCELLANEOUS: [Isoform Long]: Contains 54 additional residues in the
CC       N-terminus. {ECO:0000305}.
CC   -!- SIMILARITY: Belongs to the nucleopolyhedrovirus IE-1 protein family.
CC       {ECO:0000305}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=AAD18158.1; Type=Erroneous initiation; Note=Extended N-terminus.; Evidence={ECO:0000305};
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DR   EMBL; M21884; AAA46696.1; -; Genomic_DNA.
DR   EMBL; M16820; AAA46699.1; -; Genomic_DNA.
DR   EMBL; L22858; AAA66777.1; -; Genomic_DNA.
DR   EMBL; L22858; AAD18158.1; ALT_INIT; Genomic_DNA.
DR   PIR; A27838; RGNVBV.
DR   PIR; A28874; RGNVE2.
DR   PIR; E72868; E72868.
DR   PIR; F72867; F72867.
DR   RefSeq; NP_054171.1; NC_001623.1.
DR   RefSeq; NP_054178.1; NC_001623.1. [P11138-1]
DR   GeneID; 1403980; -.
DR   GeneID; 1403988; -.
DR   KEGG; vg:1403980; -.
DR   KEGG; vg:1403988; -.
DR   Proteomes; UP000008292; Genome.
DR   GO; GO:0039715; C:nuclear viral factory; IDA:UniProtKB.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
DR   GO; GO:0039693; P:viral DNA genome replication; IEA:UniProtKB-KW.
DR   GO; GO:0019079; P:viral genome replication; IDA:UniProtKB.
DR   InterPro; IPR005092; TATR.
DR   Pfam; PF03430; TATR; 1.
PE   1: Evidence at protein level;
KW   Alternative splicing; DNA replication; DNA-binding; Early protein;
KW   Host nucleus; Phosphoprotein; Reference proteome; Transcription;
KW   Transcription regulation; Viral DNA replication.
FT   CHAIN           1..582
FT                   /note="Trans-activating transcriptional regulatory protein"
FT                   /id="PRO_0000132847"
FT   REGION          101..131
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   MUTAGEN         15
FT                   /note="T->A: Complete loss of replicative function."
FT                   /evidence="ECO:0000269|PubMed:22496221"
FT   CONFLICT        60
FT                   /note="A -> R (in Ref. 2; AAA46699)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        210..215
FT                   /note="NSNRFS -> QFQQVL (in Ref. 2; AAA46699)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        295
FT                   /note="D -> G (in Ref. 1; AAA46696)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        581..582
FT                   /note="FN -> L (in Ref. 2; AAA46699)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   582 AA;  66881 MW;  7515BD8991818580 CRC64;
     MTQINFNASY TSASTPSRAS FDNSYSEFCD KQPNDYLSYY NHPTPDGADT VISDSETAAA
     SNFLASVNSL TDNDLVECLL KTTDNLEEAV SSAYYSESLE QPVVEQPSPS SAYHAESFEH
     SAGVNQPSAT GTKRKLDEYL DNSQGVVGQF NKIKLRPKYK KSTIQSCATL EQTINHNTNI
     CTVASTQEIT HYFTNDFAPY LMRFDDNDYN SNRFSDHMSE TGYYMFVVKK SEVKPFEIIF
     AKYVSNVVYE YTNNYYMVDN RVFVVTFDKI RFMISYNLVK ETGIEIPHSQ DVCNDETAAQ
     NCKKCHFVDV HHTFKAALTS YFNLDMYYAQ TTFVTLLQSL GERKCGFLLS KLYEMYQDKN
     LFTLPIMLSR KESNEIETAS NNFFVSPYVS QILKYSESVQ FPDNPPNKYV VDNLNLIVNK
     KSTLTYKYSS VANLLFNNYK YHDNIASNNN AENLKKVKKE DGSMHIVEQY LTQNVDNVKG
     HNFIVLSFKN EERLTIAKKN KEFYWISGEI KDVDVSQVIQ KYNRFKHHMF VIGKVNRRES
     TTLHNNLLKL LALILQGLVP LSDAITFAEQ KLNCKYKKFE FN
 
 
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