IF1A_THEKO
ID IF1A_THEKO Reviewed; 117 AA.
AC Q5JH78;
DT 30-AUG-2005, integrated into UniProtKB/Swiss-Prot.
DT 15-FEB-2005, sequence version 1.
DT 03-AUG-2022, entry version 90.
DE RecName: Full=Translation initiation factor 1A {ECO:0000255|HAMAP-Rule:MF_00216};
DE Short=aIF-1A {ECO:0000255|HAMAP-Rule:MF_00216};
GN Name=eif1a {ECO:0000255|HAMAP-Rule:MF_00216}; OrderedLocusNames=TK0802;
OS Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
OS (Pyrococcus kodakaraensis (strain KOD1)).
OC Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae;
OC Thermococcus.
OX NCBI_TaxID=69014;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-918 / JCM 12380 / KOD1;
RX PubMed=15710748; DOI=10.1101/gr.3003105;
RA Fukui T., Atomi H., Kanai T., Matsumi R., Fujiwara S., Imanaka T.;
RT "Complete genome sequence of the hyperthermophilic archaeon Thermococcus
RT kodakaraensis KOD1 and comparison with Pyrococcus genomes.";
RL Genome Res. 15:352-363(2005).
CC -!- FUNCTION: Seems to be required for maximal rate of protein
CC biosynthesis. Enhances ribosome dissociation into subunits and
CC stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal
CC subunits. {ECO:0000255|HAMAP-Rule:MF_00216}.
CC -!- SIMILARITY: Belongs to the eIF-1A family. {ECO:0000255|HAMAP-
CC Rule:MF_00216}.
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DR EMBL; AP006878; BAD84991.1; -; Genomic_DNA.
DR RefSeq; WP_011249753.1; NC_006624.1.
DR AlphaFoldDB; Q5JH78; -.
DR SMR; Q5JH78; -.
DR STRING; 69014.TK0802; -.
DR EnsemblBacteria; BAD84991; BAD84991; TK0802.
DR GeneID; 3233978; -.
DR KEGG; tko:TK0802; -.
DR PATRIC; fig|69014.16.peg.782; -.
DR eggNOG; arCOG01179; Archaea.
DR HOGENOM; CLU_109098_1_2_2; -.
DR InParanoid; Q5JH78; -.
DR OMA; ADITWRY; -.
DR OrthoDB; 102432at2157; -.
DR PhylomeDB; Q5JH78; -.
DR Proteomes; UP000000536; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003743; F:translation initiation factor activity; IBA:GO_Central.
DR GO; GO:0006413; P:translational initiation; IBA:GO_Central.
DR CDD; cd05793; S1_IF1A; 1.
DR Gene3D; 2.40.50.140; -; 1.
DR HAMAP; MF_00216; aIF_1A; 1.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR006196; RNA-binding_domain_S1_IF1.
DR InterPro; IPR001253; TIF_eIF-1A.
DR InterPro; IPR018104; TIF_eIF-1A_CS.
DR PANTHER; PTHR21668; PTHR21668; 1.
DR Pfam; PF01176; eIF-1a; 1.
DR SMART; SM00652; eIF1a; 1.
DR SUPFAM; SSF50249; SSF50249; 1.
DR TIGRFAMs; TIGR00523; eIF-1A; 1.
DR PROSITE; PS01262; IF1A; 1.
DR PROSITE; PS50832; S1_IF1_TYPE; 1.
PE 3: Inferred from homology;
KW Initiation factor; Protein biosynthesis; Reference proteome.
FT CHAIN 1..117
FT /note="Translation initiation factor 1A"
FT /id="PRO_0000145132"
FT DOMAIN 17..92
FT /note="S1-like"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00216"
SQ SEQUENCE 117 AA; 13539 MW; A99E42E81CB894B6 CRC64;
MAGKKKNDRH VEGDEVIRVP LPDRSKGQLF GVIEQALGAG WMDVRCEDGK VRRCRIPGKL
KRRMWMRVGD VVIVQPWPVQ SDERGDIVYR YTRTQVDWLL RKGKITQDFL SGGELLF