APCB_SYNP6
ID APCB_SYNP6 Reviewed; 161 AA.
AC P06113;
DT 01-JAN-1988, integrated into UniProtKB/Swiss-Prot.
DT 01-JAN-1988, sequence version 1.
DT 03-AUG-2022, entry version 139.
DE RecName: Full=Allophycocyanin beta chain;
GN Name=apcB; OrderedLocusNames=syc1187_d;
OS Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) (Anacystis
OS nidulans).
OC Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus.
OX NCBI_TaxID=269084;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=3031427; DOI=10.1007/bf00338074;
RA Houmard J., Mazel D., Moguet C., Bryant D.A., Tandeau de Marsac N.;
RT "Organization and nucleotide sequence of genes encoding core components of
RT the phycobilisomes from Synechococcus 6301.";
RL Mol. Gen. Genet. 205:404-410(1986).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 27144 / PCC 6301 / SAUG 1402/1;
RX PubMed=17211581; DOI=10.1007/s11120-006-9122-4;
RA Sugita C., Ogata K., Shikata M., Jikuya H., Takano J., Furumichi M.,
RA Kanehisa M., Omata T., Sugiura M., Sugita M.;
RT "Complete nucleotide sequence of the freshwater unicellular cyanobacterium
RT Synechococcus elongatus PCC 6301 chromosome: gene content and
RT organization.";
RL Photosyn. Res. 93:55-67(2007).
RN [3]
RP METHYLATION AT ASN-71.
RX PubMed=3782095; DOI=10.1016/s0021-9258(18)66647-5;
RA Klotz A.V., Leary J.A., Glazer A.N.;
RT "Post-translational methylation of asparaginyl residues. Identification of
RT beta-71 gamma-N-methylasparagine in allophycocyanin.";
RL J. Biol. Chem. 261:15891-15894(1986).
CC -!- FUNCTION: Light-harvesting photosynthetic bile pigment-protein from the
CC phycobiliprotein complex. Allophycocyanin has a maximum absorption at
CC approximately 650 nanometers.
CC -!- SUBUNIT: Heterodimer of an alpha and a beta chain.
CC -!- SUBCELLULAR LOCATION: Cellular thylakoid membrane; Peripheral membrane
CC protein; Cytoplasmic side. Note=Forms the core of the phycobilisome.
CC -!- PTM: Contains one covalently linked phycocyanobilin chromophore.
CC {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the phycobiliprotein family. {ECO:0000305}.
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DR EMBL; X04716; CAA28422.1; -; Genomic_DNA.
DR EMBL; AP008231; BAD79377.1; -; Genomic_DNA.
DR RefSeq; WP_011243499.1; NC_006576.1.
DR AlphaFoldDB; P06113; -.
DR SMR; P06113; -.
DR STRING; 269084.syc1187_d; -.
DR iPTMnet; P06113; -.
DR EnsemblBacteria; BAD79377; BAD79377; syc1187_d.
DR KEGG; syc:syc1187_d; -.
DR eggNOG; ENOG502Z7X0; Bacteria.
DR OMA; CIRDMDY; -.
DR Proteomes; UP000001175; Chromosome.
DR GO; GO:0030089; C:phycobilisome; IEA:UniProtKB-KW.
DR GO; GO:0031676; C:plasma membrane-derived thylakoid membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0015979; P:photosynthesis; IEA:UniProtKB-KW.
DR CDD; cd12126; APC_beta; 1.
DR Gene3D; 1.10.490.20; -; 1.
DR InterPro; IPR006245; ApcB.
DR InterPro; IPR009050; Globin-like_sf.
DR InterPro; IPR012128; Phycobilisome_asu/bsu.
DR InterPro; IPR038719; Phycobilisome_asu/bsu_sf.
DR PANTHER; PTHR34011:SF3; PTHR34011:SF3; 1.
DR Pfam; PF00502; Phycobilisome; 1.
DR PIRSF; PIRSF000081; Phycocyanin; 1.
DR SUPFAM; SSF46458; SSF46458; 1.
DR TIGRFAMs; TIGR01337; apcB; 1.
PE 1: Evidence at protein level;
KW Antenna complex; Bile pigment; Chromophore; Electron transport; Membrane;
KW Methylation; Photosynthesis; Phycobilisome; Thylakoid; Transport.
FT CHAIN 1..161
FT /note="Allophycocyanin beta chain"
FT /id="PRO_0000199104"
FT BINDING 81
FT /ligand="(2R,3E)-phycocyanobilin"
FT /ligand_id="ChEBI:CHEBI:85275"
FT /note="covalent, via 1 link"
FT /evidence="ECO:0000250"
FT MOD_RES 71
FT /note="N4-methylasparagine"
FT /evidence="ECO:0000269|PubMed:3782095"
SQ SEQUENCE 161 AA; 17393 MW; 978F7F4AC8202167 CRC64;
MQDAITAVIN ASDVQGKYLD SSALDRLKSY FQSGELRVRA AATISANSAL IVKEAVAKSL
LYSDITRPGG NMYTTRRYAA CIRDLEYYLR YATYAMLAGD TSILDERVLN GLKETYNSLG
VPIGATVQAI QAIKEVTASL VGPDAGREMG VYLDYISSGL S