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IF1C_ORYSI
ID   IF1C_ORYSI              Reviewed;         107 AA.
AC   P0C379; P12135; Q6QXY7; Q6QY51;
DT   29-MAY-2007, integrated into UniProtKB/Swiss-Prot.
DT   29-MAY-2007, sequence version 1.
DT   25-MAY-2022, entry version 74.
DE   RecName: Full=Translation initiation factor IF-1, chloroplastic {ECO:0000255|HAMAP-Rule:MF_00075};
GN   Name=infA {ECO:0000255|HAMAP-Rule:MF_00075}; ORFNames=9311102;
OS   Oryza sativa subsp. indica (Rice).
OG   Plastid; Chloroplast.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39946;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. 93-11;
RX   PubMed=15122023; DOI=10.1104/pp.103.031245;
RA   Tang J., Xia H., Cao M., Zhang X., Zeng W., Hu S., Tong W., Wang J.,
RA   Wang J., Yu J., Yang H., Zhu L.;
RT   "A comparison of rice chloroplast genomes.";
RL   Plant Physiol. 135:412-420(2004).
CC   -!- FUNCTION: One of the essential components for the initiation of protein
CC       synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit
CC       to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps
CC       modulate mRNA selection, yielding the 30S pre-initiation complex (PIC).
CC       Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are
CC       released leaving the mature 70S translation initiation complex.
CC       {ECO:0000255|HAMAP-Rule:MF_00075}.
CC   -!- SUBUNIT: Component of the 30S ribosomal translation pre-initiation
CC       complex which assembles on the 30S ribosome in the order IF-2 and IF-3,
CC       IF-1 and N-formylmethionyl-tRNA(fMet); mRNA recruitment can occur at
CC       any time during PIC assembly. {ECO:0000255|HAMAP-Rule:MF_00075}.
CC   -!- SUBCELLULAR LOCATION: Plastid, chloroplast {ECO:0000255|HAMAP-
CC       Rule:MF_00075}.
CC   -!- SIMILARITY: Belongs to the IF-1 family. {ECO:0000255|HAMAP-
CC       Rule:MF_00075}.
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DR   EMBL; AY522329; AAS46078.1; -; Genomic_DNA.
DR   RefSeq; YP_009161398.1; NC_027678.1.
DR   RefSeq; YP_654238.1; NC_008155.1.
DR   AlphaFoldDB; P0C379; -.
DR   SMR; P0C379; -.
DR   STRING; 39946.P0C379; -.
DR   EnsemblPlants; BGIOSGA034989-TA; BGIOSGA034989-PA; BGIOSGA034989.
DR   EnsemblPlants; BGIOSGA039614-TA; BGIOSGA039614-PA; BGIOSGA039614.
DR   EnsemblPlants; BGIOSGA039959-TA; BGIOSGA039959-PA; BGIOSGA039959.
DR   GeneID; 4126928; -.
DR   Gramene; BGIOSGA034989-TA; BGIOSGA034989-PA; BGIOSGA034989.
DR   Gramene; BGIOSGA039614-TA; BGIOSGA039614-PA; BGIOSGA039614.
DR   Gramene; BGIOSGA039959-TA; BGIOSGA039959-PA; BGIOSGA039959.
DR   HOGENOM; CLU_151267_3_0_1; -.
DR   OMA; RCRVKLD; -.
DR   Proteomes; UP000007015; Chloroplast.
DR   GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR   GO; GO:0009536; C:plastid; IC:Gramene.
DR   GO; GO:0043022; F:ribosome binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-UniRule.
DR   CDD; cd04451; S1_IF1; 1.
DR   Gene3D; 2.40.50.140; -; 1.
DR   HAMAP; MF_00075; IF_1; 1.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR006196; RNA-binding_domain_S1_IF1.
DR   InterPro; IPR022967; S1_dom.
DR   InterPro; IPR004368; TIF_IF1.
DR   PANTHER; PTHR33370; PTHR33370; 1.
DR   Pfam; PF01176; eIF-1a; 1.
DR   SMART; SM00316; S1; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR00008; infA; 1.
DR   PROSITE; PS50832; S1_IF1_TYPE; 1.
PE   3: Inferred from homology;
KW   Chloroplast; Initiation factor; Plastid; Protein biosynthesis;
KW   Reference proteome; RNA-binding; rRNA-binding.
FT   CHAIN           1..107
FT                   /note="Translation initiation factor IF-1, chloroplastic"
FT                   /id="PRO_0000289030"
FT   DOMAIN          8..83
FT                   /note="S1-like"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_00075"
FT   REGION          81..107
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   107 AA;  12417 MW;  55D330AF42FA0005 CRC64;
     MTEKKNRREK KNPREAKITF EGLVMEALPN GMFRVRLEND TIILGYISGK IRSSSIRILM
     GDRVKIEVSR YDSSKGRIIY RLPHKDSKRT EDSKDTEDLK DTKDSKG
 
 
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