IF1C_ORYSI
ID IF1C_ORYSI Reviewed; 107 AA.
AC P0C379; P12135; Q6QXY7; Q6QY51;
DT 29-MAY-2007, integrated into UniProtKB/Swiss-Prot.
DT 29-MAY-2007, sequence version 1.
DT 25-MAY-2022, entry version 74.
DE RecName: Full=Translation initiation factor IF-1, chloroplastic {ECO:0000255|HAMAP-Rule:MF_00075};
GN Name=infA {ECO:0000255|HAMAP-Rule:MF_00075}; ORFNames=9311102;
OS Oryza sativa subsp. indica (Rice).
OG Plastid; Chloroplast.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39946;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. 93-11;
RX PubMed=15122023; DOI=10.1104/pp.103.031245;
RA Tang J., Xia H., Cao M., Zhang X., Zeng W., Hu S., Tong W., Wang J.,
RA Wang J., Yu J., Yang H., Zhu L.;
RT "A comparison of rice chloroplast genomes.";
RL Plant Physiol. 135:412-420(2004).
CC -!- FUNCTION: One of the essential components for the initiation of protein
CC synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit
CC to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps
CC modulate mRNA selection, yielding the 30S pre-initiation complex (PIC).
CC Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are
CC released leaving the mature 70S translation initiation complex.
CC {ECO:0000255|HAMAP-Rule:MF_00075}.
CC -!- SUBUNIT: Component of the 30S ribosomal translation pre-initiation
CC complex which assembles on the 30S ribosome in the order IF-2 and IF-3,
CC IF-1 and N-formylmethionyl-tRNA(fMet); mRNA recruitment can occur at
CC any time during PIC assembly. {ECO:0000255|HAMAP-Rule:MF_00075}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast {ECO:0000255|HAMAP-
CC Rule:MF_00075}.
CC -!- SIMILARITY: Belongs to the IF-1 family. {ECO:0000255|HAMAP-
CC Rule:MF_00075}.
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DR EMBL; AY522329; AAS46078.1; -; Genomic_DNA.
DR RefSeq; YP_009161398.1; NC_027678.1.
DR RefSeq; YP_654238.1; NC_008155.1.
DR AlphaFoldDB; P0C379; -.
DR SMR; P0C379; -.
DR STRING; 39946.P0C379; -.
DR EnsemblPlants; BGIOSGA034989-TA; BGIOSGA034989-PA; BGIOSGA034989.
DR EnsemblPlants; BGIOSGA039614-TA; BGIOSGA039614-PA; BGIOSGA039614.
DR EnsemblPlants; BGIOSGA039959-TA; BGIOSGA039959-PA; BGIOSGA039959.
DR GeneID; 4126928; -.
DR Gramene; BGIOSGA034989-TA; BGIOSGA034989-PA; BGIOSGA034989.
DR Gramene; BGIOSGA039614-TA; BGIOSGA039614-PA; BGIOSGA039614.
DR Gramene; BGIOSGA039959-TA; BGIOSGA039959-PA; BGIOSGA039959.
DR HOGENOM; CLU_151267_3_0_1; -.
DR OMA; RCRVKLD; -.
DR Proteomes; UP000007015; Chloroplast.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR GO; GO:0009536; C:plastid; IC:Gramene.
DR GO; GO:0043022; F:ribosome binding; IEA:UniProtKB-UniRule.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-UniRule.
DR CDD; cd04451; S1_IF1; 1.
DR Gene3D; 2.40.50.140; -; 1.
DR HAMAP; MF_00075; IF_1; 1.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR006196; RNA-binding_domain_S1_IF1.
DR InterPro; IPR022967; S1_dom.
DR InterPro; IPR004368; TIF_IF1.
DR PANTHER; PTHR33370; PTHR33370; 1.
DR Pfam; PF01176; eIF-1a; 1.
DR SMART; SM00316; S1; 1.
DR SUPFAM; SSF50249; SSF50249; 1.
DR TIGRFAMs; TIGR00008; infA; 1.
DR PROSITE; PS50832; S1_IF1_TYPE; 1.
PE 3: Inferred from homology;
KW Chloroplast; Initiation factor; Plastid; Protein biosynthesis;
KW Reference proteome; RNA-binding; rRNA-binding.
FT CHAIN 1..107
FT /note="Translation initiation factor IF-1, chloroplastic"
FT /id="PRO_0000289030"
FT DOMAIN 8..83
FT /note="S1-like"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00075"
FT REGION 81..107
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 107 AA; 12417 MW; 55D330AF42FA0005 CRC64;
MTEKKNRREK KNPREAKITF EGLVMEALPN GMFRVRLEND TIILGYISGK IRSSSIRILM
GDRVKIEVSR YDSSKGRIIY RLPHKDSKRT EDSKDTEDLK DTKDSKG