APCD1_CHICK
ID APCD1_CHICK Reviewed; 515 AA.
AC Q5R2I8;
DT 13-JUL-2010, integrated into UniProtKB/Swiss-Prot.
DT 04-JAN-2005, sequence version 1.
DT 03-AUG-2022, entry version 91.
DE RecName: Full=Protein APCDD1;
DE AltName: Full=Adenomatosis polyposis coli down-regulated 1 protein homolog;
DE Short=cAPCDD1;
DE AltName: Full=Protein primglo1;
DE Flags: Precursor;
GN Name=APCDD1; Synonyms=PGO1;
OS Gallus gallus (Chicken).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae;
OC Phasianinae; Gallus.
OX NCBI_TaxID=9031;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], AND DEVELOPMENTAL STAGE.
RC TISSUE=Embryo;
RX PubMed=15642085; DOI=10.1111/j.1525-142x.2005.05002.x;
RA Kuraku S., Usuda R., Kuratani S.;
RT "Comprehensive survey of carapacial ridge-specific genes in turtle implies
RT co-option of some regulatory genes in carapace evolution.";
RL Evol. Dev. 7:3-17(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [MRNA].
RA Kimura J., Kuroiwa A.;
RT "Primglo, a Wnt target novel endoplasmic reticulum protein that modulates
RT Wnt signaling.";
RL Submitted (DEC-2004) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP FUNCTION.
RX PubMed=20393562; DOI=10.1038/nature08875;
RA Shimomura Y., Agalliu D., Vonica A., Luria V., Wajid M., Baumer A.,
RA Belli S., Petukhova L., Schinzel A., Brivanlou A.H., Barres B.A.,
RA Christiano A.M.;
RT "APCDD1 is a novel Wnt inhibitor mutated in hereditary hypotrichosis
RT simplex.";
RL Nature 464:1043-1047(2010).
CC -!- FUNCTION: Negative regulator of the Wnt signaling pathway. Inhibits Wnt
CC signaling in a cell-autonomous manner and functions upstream of beta-
CC catenin. {ECO:0000269|PubMed:20393562}.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000250}; Single-pass type I
CC membrane protein {ECO:0000250}.
CC -!- DEVELOPMENTAL STAGE: Expressed in the dorsal somite derivatives of the
CC chicken as well as in the dorsal subpopulation of trunk crest cells.
CC {ECO:0000269|PubMed:15642085}.
CC -!- SIMILARITY: Belongs to the APCDD1 family. {ECO:0000305}.
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DR EMBL; AB124571; BAD74121.1; -; mRNA.
DR EMBL; AB196971; BAE02562.1; -; mRNA.
DR RefSeq; NP_001012959.1; NM_001012941.2.
DR AlphaFoldDB; Q5R2I8; -.
DR STRING; 9031.ENSGALP00000001313; -.
DR PaxDb; Q5R2I8; -.
DR PRIDE; Q5R2I8; -.
DR Ensembl; ENSGALT00000102628; ENSGALP00000065748; ENSGALG00000050840.
DR GeneID; 426765; -.
DR KEGG; gga:426765; -.
DR CTD; 147495; -.
DR VEuPathDB; HostDB:geneid_426765; -.
DR eggNOG; ENOG502QQ0C; Eukaryota.
DR GeneTree; ENSGT00640000091492; -.
DR HOGENOM; CLU_035648_0_0_1; -.
DR InParanoid; Q5R2I8; -.
DR OMA; GRHTWPL; -.
DR OrthoDB; 613671at2759; -.
DR PhylomeDB; Q5R2I8; -.
DR TreeFam; TF329491; -.
DR PRO; PR:Q5R2I8; -.
DR Proteomes; UP000000539; Chromosome 2.
DR Bgee; ENSGALG00000050840; Expressed in lung and 11 other tissues.
DR GO; GO:0005887; C:integral component of plasma membrane; ISS:UniProtKB.
DR GO; GO:0005886; C:plasma membrane; IBA:GO_Central.
DR GO; GO:0017147; F:Wnt-protein binding; ISS:UniProtKB.
DR GO; GO:0030178; P:negative regulation of Wnt signaling pathway; IDA:UniProtKB.
DR GO; GO:0016055; P:Wnt signaling pathway; IEA:UniProtKB-KW.
DR InterPro; IPR042425; APCDD1.
DR InterPro; IPR029405; APCDD1_dom.
DR PANTHER; PTHR31021; PTHR31021; 1.
DR Pfam; PF14921; APCDDC; 2.
DR SMART; SM01352; APCDDC; 2.
PE 2: Evidence at transcript level;
KW Cell membrane; Glycoprotein; Membrane; Reference proteome; Signal;
KW Transmembrane; Wnt signaling pathway.
FT SIGNAL 1..26
FT /evidence="ECO:0000255"
FT CHAIN 27..515
FT /note="Protein APCDD1"
FT /id="PRO_0000395838"
FT TOPO_DOM 27..490
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 491..508
FT /evidence="ECO:0000255"
FT TOPO_DOM 509..515
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT CARBOHYD 100
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 168
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 319
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 515 AA; 59100 MW; B529D4B204B1385D CRC64;
MFVPYGSLMR YLFPALLLHG LGEGSALLHP DSRSHPRSLE KSAWRAFKES QCHHMLKHLH
NGARITVQMP PNIEGHWVST GCEVRAGPEF ITRSYRFYHN NTFKAYQFYY GGNRCTNPIY
TLVIRGKIRL RQASWIIRGG TEADYQLRNI QIISHNEAVA KKLSELVNNT CPGFIPEDSP
WEQDVSYDLL REENGCECTK ALNFAMHELQ LIRVEKQYLH HNLDHLVEEL FLGDIHTDAT
QRRYYRPSSY QPPLQNAKNH DRTCIACRII YRSDEHHPPI LPPKADLTIG LHGEWVSQRC
EVRPEVLFLT RHFIFHDNNN TWEGHYYHYS DPICKHPTFT IYAKGRYSRG VHSAKVMGGT
EFVFKVNHMK VTPMDVSTAS LLNVFNGNEC GAQGSWQVGV QQDVTHTNGC IALGIRLPHT
EYEIFKMEQD ARGRYLLYNG QRPSDGSSPD RPEKRATSYQ MPLIQCASSV PRSEESPEEN
KIRLYSSRAP AKHPSASALA LVLFICTVSY WDILS