IF1_STRPN
ID IF1_STRPN Reviewed; 72 AA.
AC P65121; Q97SU0;
DT 11-OCT-2004, integrated into UniProtKB/Swiss-Prot.
DT 11-OCT-2004, sequence version 1.
DT 03-AUG-2022, entry version 99.
DE RecName: Full=Translation initiation factor IF-1 {ECO:0000255|HAMAP-Rule:MF_00075};
GN Name=infA {ECO:0000255|HAMAP-Rule:MF_00075}; OrderedLocusNames=SP_0232;
OS Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4).
OC Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae;
OC Streptococcus.
OX NCBI_TaxID=170187;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-334 / TIGR4;
RX PubMed=11463916; DOI=10.1126/science.1061217;
RA Tettelin H., Nelson K.E., Paulsen I.T., Eisen J.A., Read T.D.,
RA Peterson S.N., Heidelberg J.F., DeBoy R.T., Haft D.H., Dodson R.J.,
RA Durkin A.S., Gwinn M.L., Kolonay J.F., Nelson W.C., Peterson J.D.,
RA Umayam L.A., White O., Salzberg S.L., Lewis M.R., Radune D.,
RA Holtzapple E.K., Khouri H.M., Wolf A.M., Utterback T.R., Hansen C.L.,
RA McDonald L.A., Feldblyum T.V., Angiuoli S.V., Dickinson T., Hickey E.K.,
RA Holt I.E., Loftus B.J., Yang F., Smith H.O., Venter J.C., Dougherty B.A.,
RA Morrison D.A., Hollingshead S.K., Fraser C.M.;
RT "Complete genome sequence of a virulent isolate of Streptococcus
RT pneumoniae.";
RL Science 293:498-506(2001).
RN [2]
RP X-RAY CRYSTALLOGRAPHY (2.02 ANGSTROMS).
RG Center for Structural Genomics of Infectious Diseases (CSGID);
RA Stogios P.J., Wawrzak Z., Onopriyenko O., Savchenko A., Anderson W.F.;
RT "Crystal structure of translation initiation factor IF-1 from Streptococcus
RT pneumoniae TIGR4.";
RL Submitted (JUN-2014) to the PDB data bank.
CC -!- FUNCTION: One of the essential components for the initiation of protein
CC synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit
CC to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps
CC modulate mRNA selection, yielding the 30S pre-initiation complex (PIC).
CC Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are
CC released leaving the mature 70S translation initiation complex.
CC {ECO:0000255|HAMAP-Rule:MF_00075}.
CC -!- SUBUNIT: Component of the 30S ribosomal translation pre-initiation
CC complex which assembles on the 30S ribosome in the order IF-2 and IF-3,
CC IF-1 and N-formylmethionyl-tRNA(fMet); mRNA recruitment can occur at
CC any time during PIC assembly. {ECO:0000255|HAMAP-Rule:MF_00075}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00075}.
CC -!- SIMILARITY: Belongs to the IF-1 family. {ECO:0000255|HAMAP-
CC Rule:MF_00075}.
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DR EMBL; AE005672; AAK74412.1; -; Genomic_DNA.
DR PIR; C95027; C95027.
DR RefSeq; WP_001029883.1; NZ_AKVY01000001.1.
DR PDB; 4QL5; X-ray; 2.02 A; A/B=1-72.
DR PDBsum; 4QL5; -.
DR AlphaFoldDB; P65121; -.
DR SMR; P65121; -.
DR STRING; 170187.SP_0232; -.
DR EnsemblBacteria; AAK74412; AAK74412; SP_0232.
DR GeneID; 60232747; -.
DR GeneID; 61537047; -.
DR GeneID; 64075828; -.
DR GeneID; 66805438; -.
DR KEGG; spn:SP_0232; -.
DR eggNOG; COG0361; Bacteria.
DR OMA; AHVSGKM; -.
DR PhylomeDB; P65121; -.
DR BioCyc; SPNE170187:G1FZB-236-MON; -.
DR Proteomes; UP000000585; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0043022; F:ribosome binding; IEA:UniProtKB-UniRule.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-UniRule.
DR CDD; cd04451; S1_IF1; 1.
DR Gene3D; 2.40.50.140; -; 1.
DR HAMAP; MF_00075; IF_1; 1.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR006196; RNA-binding_domain_S1_IF1.
DR InterPro; IPR022967; S1_dom.
DR InterPro; IPR004368; TIF_IF1.
DR PANTHER; PTHR33370; PTHR33370; 1.
DR Pfam; PF01176; eIF-1a; 1.
DR SMART; SM00316; S1; 1.
DR SUPFAM; SSF50249; SSF50249; 1.
DR TIGRFAMs; TIGR00008; infA; 1.
DR PROSITE; PS50832; S1_IF1_TYPE; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Cytoplasm; Initiation factor; Protein biosynthesis;
KW RNA-binding; rRNA-binding.
FT CHAIN 1..72
FT /note="Translation initiation factor IF-1"
FT /id="PRO_0000095879"
FT DOMAIN 1..72
FT /note="S1-like"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00075"
FT STRAND 7..16
FT /evidence="ECO:0007829|PDB:4QL5"
FT STRAND 22..26
FT /evidence="ECO:0007829|PDB:4QL5"
FT STRAND 31..36
FT /evidence="ECO:0007829|PDB:4QL5"
FT HELIX 38..41
FT /evidence="ECO:0007829|PDB:4QL5"
FT TURN 42..44
FT /evidence="ECO:0007829|PDB:4QL5"
FT STRAND 52..57
FT /evidence="ECO:0007829|PDB:4QL5"
FT STRAND 64..70
FT /evidence="ECO:0007829|PDB:4QL5"
SQ SEQUENCE 72 AA; 8203 MW; E4BA760D8186419F CRC64;
MAKDDVIEVE GKVVDTMPNA MFTVELENGH QILATVSGKI RKNYIRILAG DRVTVEMSPY
DLTRGRITYR FK