IF2C_GRATL
ID IF2C_GRATL Reviewed; 744 AA.
AC Q6B8S2;
DT 18-APR-2006, integrated into UniProtKB/Swiss-Prot.
DT 13-SEP-2004, sequence version 1.
DT 03-AUG-2022, entry version 82.
DE RecName: Full=Translation initiation factor IF-2, chloroplastic;
GN Name=infB; OrderedLocusNames=Grc000132;
OS Gracilaria tenuistipitata var. liui (Red alga).
OG Plastid; Chloroplast.
OC Eukaryota; Rhodophyta; Florideophyceae; Rhodymeniophycidae; Gracilariales;
OC Gracilariaceae; Agarophyton; Agarophyton tenuistipitatum.
OX NCBI_TaxID=285951;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=15638458; DOI=10.1007/s00239-004-2638-3;
RA Hagopian J.C., Reis M., Kitajima J.P., Bhattacharya D., de Oliveira M.C.;
RT "Comparative analysis of the complete plastid genome sequence of the red
RT alga Gracilaria tenuistipitata var. liui provides insights into the
RT evolution of rhodoplasts and their relationship to other plastids.";
RL J. Mol. Evol. 59:464-477(2004).
CC -!- FUNCTION: One of the essential components for the initiation of protein
CC synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis
CC and promotes its binding to the 30S ribosomal subunits. Also involved
CC in the hydrolysis of GTP during the formation of the 70S ribosomal
CC complex (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast.
CC -!- SIMILARITY: Belongs to the TRAFAC class translation factor GTPase
CC superfamily. Classic translation factor GTPase family. IF-2 subfamily.
CC {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AY673996; AAT79713.1; -; Genomic_DNA.
DR RefSeq; YP_063638.1; NC_006137.1.
DR AlphaFoldDB; Q6B8S2; -.
DR SMR; Q6B8S2; -.
DR GeneID; 2943949; -.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-UniRule.
DR CDD; cd03702; IF2_mtIF2_II; 1.
DR Gene3D; 3.40.50.10050; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_00100_B; IF_2_B; 1.
DR InterPro; IPR044145; IF2_II.
DR InterPro; IPR006847; IF2_N.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR000178; TF_IF2_bacterial-like.
DR InterPro; IPR015760; TIF_IF2.
DR InterPro; IPR023115; TIF_IF2_dom3.
DR InterPro; IPR036925; TIF_IF2_dom3_sf.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR PANTHER; PTHR43381; PTHR43381; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF11987; IF-2; 1.
DR Pfam; PF04760; IF2_N; 1.
DR PRINTS; PR00315; ELONGATNFCT.
DR SUPFAM; SSF50447; SSF50447; 2.
DR SUPFAM; SSF52156; SSF52156; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00487; IF-2; 1.
DR TIGRFAMs; TIGR00231; small_GTP; 1.
DR PROSITE; PS51722; G_TR_2; 1.
DR PROSITE; PS01176; IF2; 1.
PE 3: Inferred from homology;
KW Chloroplast; GTP-binding; Initiation factor; Nucleotide-binding; Plastid;
KW Protein biosynthesis.
FT CHAIN 1..744
FT /note="Translation initiation factor IF-2, chloroplastic"
FT /id="PRO_0000232592"
FT DOMAIN 244..417
FT /note="tr-type G"
FT REGION 113..146
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 253..260
FT /note="G1"
FT /evidence="ECO:0000250"
FT REGION 278..282
FT /note="G2"
FT /evidence="ECO:0000250"
FT REGION 303..306
FT /note="G3"
FT /evidence="ECO:0000250"
FT REGION 357..360
FT /note="G4"
FT /evidence="ECO:0000250"
FT REGION 393..395
FT /note="G5"
FT /evidence="ECO:0000250"
FT COMPBIAS 132..146
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 253..260
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000250"
FT BINDING 303..307
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000250"
FT BINDING 357..360
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000250"
SQ SEQUENCE 744 AA; 82984 MW; 70CFA35E6AB08B5A CRC64;
MRYSNVIDFS ICMSIKSENT FLLENPKFIK NLKFFNIHSS QEPKSPTDIR NSVENSDFNV
QLENKLKNSF KQDGKQKSKK KKILSVDLDQ EHIFKKKNKS KVIISAPDDL TNNSEGSFKS
GKQKKKEKGK HKQNVNKDIH HTKNNRLSNL DPLDDINKDK SVIIDSSLSI EELSIKLKIP
PAEIITGLFL KGISVTVNQI IDIAIATQVA QKYNFTVINQ NQNNQSELDQ SDKLQQVSTI
TSINRAPIVT ILGHVDHGKT TLLDAIRNTN AAGKEIGGIT QSIKAYEVNW PYNSSNQKLI
FIDTPGHEAF SSMRLRCAQI TDIVILIIAA DDGLKPQTIE AINYISSKKT PFIVAINKID
KANLNLIRVR EELATYNIIS TDWGGEIQFI EISALQKRNI SQLLTAICSL AEFINLKADP
TELVQGSILE AYLDKTKGIV VNIIVLSGTL HIGDIIVSGH SYGRVKKIIN SLGNELIQAG
PSSILEVLGF YSIPQTGRYF QVVNSEKEAK KMIAQIPLSG ITQTTKNILN LNPKVYNHNL
NTRSLNLIIK ADTQGTIDAI INSFIQISQK KIKLNILTAS LGVVSNTDLD LAFSTQALII
AFNINISTNI LNAAEKLNLS LRKFVLIYDL VDYVTYSMLD LVDPEYDKIL IGQAEVQTTF
TINKGTVAGC IVKSGKLKKD ALIGVYRKNK LIYEGVINSL KRMKNDVNEV VIGNECGILS
KDYHFWQSED LIKAYELHEK AKTL