IF2C_NEOYE
ID IF2C_NEOYE Reviewed; 768 AA.
AC Q1XDN0;
DT 06-FEB-2007, integrated into UniProtKB/Swiss-Prot.
DT 02-MAY-2006, sequence version 1.
DT 03-AUG-2022, entry version 68.
DE RecName: Full=Translation initiation factor IF-2, chloroplastic;
GN Name=infB;
OS Neopyropia yezoensis (Susabi-nori) (Pyropia yezoensis).
OG Plastid; Chloroplast.
OC Eukaryota; Rhodophyta; Bangiophyceae; Bangiales; Bangiaceae; Neopyropia.
OX NCBI_TaxID=2788;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=U-51;
RA Kunimoto M., Morishima K., Yoshikawa M., Fukuda S., Kobayashi T.,
RA Kobayashi M., Okazaki T., Ohara I., Nakayama I.;
RT "Whole genome sequence of Porphyra yezoensis chloroplast.";
RL Submitted (NOV-2003) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: One of the essential components for the initiation of protein
CC synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis
CC and promotes its binding to the 30S ribosomal subunits. Also involved
CC in the hydrolysis of GTP during the formation of the 70S ribosomal
CC complex (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast.
CC -!- SIMILARITY: Belongs to the TRAFAC class translation factor GTPase
CC superfamily. Classic translation factor GTPase family. IF-2 subfamily.
CC {ECO:0000305}.
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DR EMBL; AP006715; BAE92381.1; -; Genomic_DNA.
DR RefSeq; YP_536938.1; NC_007932.1.
DR AlphaFoldDB; Q1XDN0; -.
DR SMR; Q1XDN0; -.
DR GeneID; 3978891; -.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-UniRule.
DR CDD; cd03702; IF2_mtIF2_II; 1.
DR Gene3D; 3.40.50.10050; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_00100_B; IF_2_B; 1.
DR InterPro; IPR044145; IF2_II.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR000178; TF_IF2_bacterial-like.
DR InterPro; IPR015760; TIF_IF2.
DR InterPro; IPR023115; TIF_IF2_dom3.
DR InterPro; IPR036925; TIF_IF2_dom3_sf.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR PANTHER; PTHR43381; PTHR43381; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF11987; IF-2; 1.
DR PRINTS; PR00315; ELONGATNFCT.
DR SUPFAM; SSF50447; SSF50447; 2.
DR SUPFAM; SSF52156; SSF52156; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00487; IF-2; 1.
DR TIGRFAMs; TIGR00231; small_GTP; 1.
DR PROSITE; PS51722; G_TR_2; 1.
PE 3: Inferred from homology;
KW Chloroplast; GTP-binding; Initiation factor; Nucleotide-binding; Plastid;
KW Protein biosynthesis.
FT CHAIN 1..768
FT /note="Translation initiation factor IF-2, chloroplastic"
FT /id="PRO_0000275386"
FT DOMAIN 261..434
FT /note="tr-type G"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 54..77
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 155..176
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 270..277
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000250"
FT BINDING 320..324
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000250"
FT BINDING 374..377
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000250"
SQ SEQUENCE 768 AA; 84825 MW; 88D7075C7D8B61E7 CRC64;
MFLNNQNFEN RSSRSSSNIN SSETIVDLKN PQIIYKIRLE SVNNDNLLNL DLDKSESHTG
GEQHLELSSP PKLDKKSKNF NKIHDLVDSK KNKNRQRKKI KTKIHIDDDD DNFRDSNSNV
SQTAGDLAIS LMRPPKPKVE VVKKLTSNKK SIRQKKVAVT PSQNSASIQS NSPPESISIT
NPLTIQELSK LICVQETDII KYLFLKRISV TMNQTIDASI ISSVADNFGI AVESNVKENN
NGLSSNLDNS NAFYETGNYI KRPPIVTVMG HVDHGKTTLL DYIRKSNNAN KEIGGITQAI
AAYEVEYIKK DNKQKIVFLD TPGHEAFTSM RSRGANLTDV AIIIIAADDG VKPQTIEAIN
HIQKANVPFV IAISKIDKAG SNTDIIEQDL LKYNVMSEKL GGQVPIIPIS SLTGQNVDKL
LETITLLAEL EDLKADPTQP AQGIIIEAHL DKSHGPVATL LIQNGTLNIS DNLVIGSAYA
KIRVIINNAK EKINLAIPSS VVEIWGLSSV PATGEIALAV KSDKEAKLKA IENTSKDSSI
IQKQRALNSR ITLDTLKNTN SKDISKQISL IIKTDNQGST EAILDSLSQF PQSKVQLNVV
SIMPGEITAT DVELASTTNS TLIGFNTNFA PGTKQASAKS NILIENYQII YALIEDIKRR
MEDLLDPEYS EVPVGEAEVS TVFSLANRKI AGCRVINNKL LKNSWIKVIR EEKVIYQGKI
ESLKRVREDV EEIQAGNECG IFISEFQLWQ SGDKIHSFDL IPKQKSLF