IF2P_IGNH4
ID IF2P_IGNH4 Reviewed; 609 AA.
AC A8A8D3;
DT 20-MAY-2008, integrated into UniProtKB/Swiss-Prot.
DT 23-OCT-2007, sequence version 1.
DT 03-AUG-2022, entry version 85.
DE RecName: Full=Probable translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100};
GN Name=infB {ECO:0000255|HAMAP-Rule:MF_00100}; OrderedLocusNames=Igni_0001;
OS Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125).
OC Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales;
OC Desulfurococcaceae; Ignicoccus.
OX NCBI_TaxID=453591;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=KIN4/I / DSM 18386 / JCM 14125;
RX PubMed=19000309; DOI=10.1186/gb-2008-9-11-r158;
RA Podar M., Anderson I., Makarova K.S., Elkins J.G., Ivanova N., Wall M.A.,
RA Lykidis A., Mavromatis K., Sun H., Hudson M.E., Chen W., Deciu C.,
RA Hutchison D., Eads J.R., Anderson A., Fernandes F., Szeto E., Lapidus A.,
RA Kyrpides N.C., Saier M.H. Jr., Richardson P.M., Rachel R., Huber H.,
RA Eisen J.A., Koonin E.V., Keller M., Stetter K.O.;
RT "A genomic analysis of the archaeal system Ignicoccus hospitalis-
RT Nanoarchaeum equitans.";
RL Genome Biol. 9:R158.1-R158.18(2008).
CC -!- FUNCTION: Function in general translation initiation by promoting the
CC binding of the formylmethionine-tRNA to ribosomes. Seems to function
CC along with eIF-2. {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SIMILARITY: Belongs to the TRAFAC class translation factor GTPase
CC superfamily. Classic translation factor GTPase family. IF-2 subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_00100}.
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DR EMBL; CP000816; ABU81185.1; -; Genomic_DNA.
DR RefSeq; WP_011998037.1; NC_009776.1.
DR AlphaFoldDB; A8A8D3; -.
DR SMR; A8A8D3; -.
DR STRING; 453591.Igni_0001; -.
DR EnsemblBacteria; ABU81185; ABU81185; Igni_0001.
DR GeneID; 5562612; -.
DR KEGG; iho:Igni_0001; -.
DR eggNOG; arCOG01560; Archaea.
DR HOGENOM; CLU_002656_3_3_2; -.
DR OMA; FRQSKPA; -.
DR OrthoDB; 17053at2157; -.
DR PhylomeDB; A8A8D3; -.
DR Proteomes; UP000000262; Chromosome.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-UniRule.
DR Gene3D; 3.40.50.10050; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_00100_A; IF_2_A; 1.
DR InterPro; IPR004161; EFTu-like_2.
DR InterPro; IPR029459; EFTU-type.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR004544; TF_aIF-2_arc.
DR InterPro; IPR015760; TIF_IF2.
DR InterPro; IPR023115; TIF_IF2_dom3.
DR InterPro; IPR036925; TIF_IF2_dom3_sf.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR PANTHER; PTHR43381; PTHR43381; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF03144; GTP_EFTU_D2; 1.
DR Pfam; PF14578; GTP_EFTU_D4; 1.
DR Pfam; PF11987; IF-2; 1.
DR PRINTS; PR00315; ELONGATNFCT.
DR SUPFAM; SSF50447; SSF50447; 1.
DR SUPFAM; SSF52156; SSF52156; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00491; aIF-2; 1.
DR TIGRFAMs; TIGR00231; small_GTP; 1.
DR PROSITE; PS51722; G_TR_2; 1.
PE 3: Inferred from homology;
KW GTP-binding; Initiation factor; Nucleotide-binding; Protein biosynthesis;
KW Reference proteome.
FT CHAIN 1..609
FT /note="Probable translation initiation factor IF-2"
FT /id="PRO_0000335524"
FT DOMAIN 12..230
FT /note="tr-type G"
FT REGION 21..28
FT /note="G1"
FT /evidence="ECO:0000250"
FT REGION 46..50
FT /note="G2"
FT /evidence="ECO:0000250"
FT REGION 86..89
FT /note="G3"
FT /evidence="ECO:0000250"
FT REGION 140..143
FT /note="G4"
FT /evidence="ECO:0000250"
FT REGION 208..210
FT /note="G5"
FT /evidence="ECO:0000250"
FT BINDING 21..28
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 86..90
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 140..143
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
SQ SEQUENCE 609 AA; 67806 MW; 55FA63280558D146 CRC64;
MLNLSAEQRP RLRQPIVAVL GHVDHGKTTL LDKIRGTVVA LKEPGQITQH IGASLVPTDV
IEKVTEPLKK IIPTVKLELP GLLFIDTPGH EIFSNLRRRG GAVADLAILV VDLNEGFQPQ
TYEAVEILKQ RRVPFVVAAN KIDRIPGWRS YPDQPFLISY RKQSEEVRER LDNKIYEIMG
ELAKLGFDSE RFDRITNFTR QIAIVPISAK TGEGIPELLA VLAGLAQRYM KGRLKYVEGP
AKGVIMEVKE EPGYGSTIDT IIYDGIIRQG DTIVVGGIEG PIVTKVRALL VPAPLTEMRA
TKRFEPVEEV SAAAGVKIVA PGLEKAVAGA PVYVVDSPEK LEELKEQVKR EVEEVMIETD
KEGVIVKADT LGTLEALVQF LKNRGIPVRM ARVGPVTKRD IVEAMTVKSK NKEYGVILAF
NVKVLPEAKE LAEKEGIKIF QHNVIYRLIE EFEEWLKALR EEEKRKVLET LVRPGKIRIL
PGFVFRRSDP AIVGVEVLGG VIKPKYPLMK EDGSRVGSIL QIQDKGQSVP EARAGQQVAI
SIKGRVMVGR HIHEGDVLYT DVPAEHAKLW LTKFKNELSD DEKFVLQEII KIKRKQNPLY
GVVLPSPSS