IF2P_METBF
ID IF2P_METBF Reviewed; 591 AA.
AC Q466D5;
DT 21-MAR-2006, integrated into UniProtKB/Swiss-Prot.
DT 13-SEP-2005, sequence version 1.
DT 03-AUG-2022, entry version 109.
DE RecName: Full=Probable translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100};
GN Name=infB {ECO:0000255|HAMAP-Rule:MF_00100}; OrderedLocusNames=Mbar_A3384;
OS Methanosarcina barkeri (strain Fusaro / DSM 804).
OC Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia;
OC Methanosarcinales; Methanosarcinaceae; Methanosarcina.
OX NCBI_TaxID=269797;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Fusaro / DSM 804;
RX PubMed=16980466; DOI=10.1128/jb.00810-06;
RA Maeder D.L., Anderson I., Brettin T.S., Bruce D.C., Gilna P., Han C.S.,
RA Lapidus A., Metcalf W.W., Saunders E., Tapia R., Sowers K.R.;
RT "The Methanosarcina barkeri genome: comparative analysis with
RT Methanosarcina acetivorans and Methanosarcina mazei reveals extensive
RT rearrangement within methanosarcinal genomes.";
RL J. Bacteriol. 188:7922-7931(2006).
CC -!- FUNCTION: Function in general translation initiation by promoting the
CC binding of the formylmethionine-tRNA to ribosomes. Seems to function
CC along with eIF-2. {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SIMILARITY: Belongs to the TRAFAC class translation factor GTPase
CC superfamily. Classic translation factor GTPase family. IF-2 subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_00100}.
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DR EMBL; CP000099; AAZ72257.1; -; Genomic_DNA.
DR RefSeq; WP_011308296.1; NC_007355.1.
DR AlphaFoldDB; Q466D5; -.
DR SMR; Q466D5; -.
DR STRING; 269797.Mbar_A3384; -.
DR EnsemblBacteria; AAZ72257; AAZ72257; Mbar_A3384.
DR GeneID; 3624821; -.
DR KEGG; mba:Mbar_A3384; -.
DR eggNOG; arCOG01560; Archaea.
DR HOGENOM; CLU_002656_3_3_2; -.
DR OMA; FRQSKPA; -.
DR OrthoDB; 17053at2157; -.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-UniRule.
DR Gene3D; 3.40.50.10050; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_00100_A; IF_2_A; 1.
DR InterPro; IPR004161; EFTu-like_2.
DR InterPro; IPR029459; EFTU-type.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR004544; TF_aIF-2_arc.
DR InterPro; IPR015760; TIF_IF2.
DR InterPro; IPR023115; TIF_IF2_dom3.
DR InterPro; IPR036925; TIF_IF2_dom3_sf.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR PANTHER; PTHR43381; PTHR43381; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF03144; GTP_EFTU_D2; 1.
DR Pfam; PF14578; GTP_EFTU_D4; 1.
DR Pfam; PF11987; IF-2; 1.
DR PRINTS; PR00315; ELONGATNFCT.
DR SUPFAM; SSF50447; SSF50447; 1.
DR SUPFAM; SSF52156; SSF52156; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00491; aIF-2; 1.
DR TIGRFAMs; TIGR00231; small_GTP; 1.
DR PROSITE; PS51722; G_TR_2; 1.
DR PROSITE; PS01176; IF2; 1.
PE 3: Inferred from homology;
KW GTP-binding; Initiation factor; Nucleotide-binding; Protein biosynthesis.
FT CHAIN 1..591
FT /note="Probable translation initiation factor IF-2"
FT /id="PRO_0000228266"
FT DOMAIN 7..223
FT /note="tr-type G"
FT REGION 16..23
FT /note="G1"
FT /evidence="ECO:0000250"
FT REGION 41..45
FT /note="G2"
FT /evidence="ECO:0000250"
FT REGION 78..81
FT /note="G3"
FT /evidence="ECO:0000250"
FT REGION 132..135
FT /note="G4"
FT /evidence="ECO:0000250"
FT REGION 200..202
FT /note="G5"
FT /evidence="ECO:0000250"
FT BINDING 16..23
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 78..82
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 132..135
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
SQ SEQUENCE 591 AA; 64938 MW; DBE03A08D9B911BB CRC64;
MADKKNLRTP IVCVMGHVDH GKTTLLDKIR GTAIVSGEAG AITQHIGATE VPIDVIINKL
GDPRLRDRFI VPGLLFIDTP GHHAFTTLRS RGGALADLAI VVVDINEGFK PQTYESLQIL
KRFKTPFVVV ANKIDRIGGW VSQKDLPFAV TFKKQSEDVQ ARLETKLYEV IGELYNQGFA
AERYDRVTNF QKTLGVVPVS AMTGEGIPDV LMVLLGLAQK FLEANLHYSA KGPGVGTVLE
VKEEKGLGAT LDVILYDGTL KKGDTVVIGS LGKPIQTKVR ALLKPRELSE MRYESKFKQV
NKVTAAVGVK ISAPGLEGAL AGSPIRVANE DTLDEIVDQI KSEIDEVRID TGAVGIMIKA
DTLGSLEALV HEFQKDEVSI RKAEVGDISH RDAIEASTVE DPLYSVIIGF NVKVHPDARD
FLQESTVKVF TSDVIYRLVE DYQKYVKEQQ EQAEKRIFET IIRPGKFKIL PGCIFRQSKP
AVVGIRVLGG VVRTNADVML ENGNVVGKIK GLQIEGENIP SAGVGKEVAM AIEGATVGRQ
IKEEDVLYVN VPERHAKVLE HEIYDSLSTD EKETLDIFLS LKRKDNPFWA K