IF2P_METMA
ID IF2P_METMA Reviewed; 591 AA.
AC Q8PU78;
DT 10-OCT-2002, integrated into UniProtKB/Swiss-Prot.
DT 10-OCT-2002, sequence version 1.
DT 03-AUG-2022, entry version 136.
DE RecName: Full=Probable translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100};
GN Name=infB {ECO:0000255|HAMAP-Rule:MF_00100}; OrderedLocusNames=MM_2463;
OS Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM
OS 11833 / OCM 88) (Methanosarcina frisia).
OC Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia;
OC Methanosarcinales; Methanosarcinaceae; Methanosarcina.
OX NCBI_TaxID=192952;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88;
RX PubMed=12125824;
RA Deppenmeier U., Johann A., Hartsch T., Merkl R., Schmitz R.A.,
RA Martinez-Arias R., Henne A., Wiezer A., Baeumer S., Jacobi C.,
RA Brueggemann H., Lienard T., Christmann A., Boemecke M., Steckel S.,
RA Bhattacharyya A., Lykidis A., Overbeek R., Klenk H.-P., Gunsalus R.P.,
RA Fritz H.-J., Gottschalk G.;
RT "The genome of Methanosarcina mazei: evidence for lateral gene transfer
RT between Bacteria and Archaea.";
RL J. Mol. Microbiol. Biotechnol. 4:453-461(2002).
CC -!- FUNCTION: Function in general translation initiation by promoting the
CC binding of the formylmethionine-tRNA to ribosomes. Seems to function
CC along with eIF-2. {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SIMILARITY: Belongs to the TRAFAC class translation factor GTPase
CC superfamily. Classic translation factor GTPase family. IF-2 subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_00100}.
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DR EMBL; AE008384; AAM32159.1; -; Genomic_DNA.
DR RefSeq; WP_011034381.1; NC_003901.1.
DR AlphaFoldDB; Q8PU78; -.
DR SMR; Q8PU78; -.
DR STRING; 192952.MM_2463; -.
DR EnsemblBacteria; AAM32159; AAM32159; MM_2463.
DR GeneID; 24882185; -.
DR KEGG; mma:MM_2463; -.
DR PATRIC; fig|192952.21.peg.2818; -.
DR eggNOG; arCOG01560; Archaea.
DR HOGENOM; CLU_002656_3_3_2; -.
DR OMA; FRQSKPA; -.
DR Proteomes; UP000000595; Chromosome.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-UniRule.
DR Gene3D; 3.40.50.10050; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_00100_A; IF_2_A; 1.
DR InterPro; IPR004161; EFTu-like_2.
DR InterPro; IPR029459; EFTU-type.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR004544; TF_aIF-2_arc.
DR InterPro; IPR015760; TIF_IF2.
DR InterPro; IPR023115; TIF_IF2_dom3.
DR InterPro; IPR036925; TIF_IF2_dom3_sf.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR PANTHER; PTHR43381; PTHR43381; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF03144; GTP_EFTU_D2; 1.
DR Pfam; PF14578; GTP_EFTU_D4; 1.
DR Pfam; PF11987; IF-2; 1.
DR PRINTS; PR00315; ELONGATNFCT.
DR SUPFAM; SSF50447; SSF50447; 1.
DR SUPFAM; SSF52156; SSF52156; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00491; aIF-2; 1.
DR TIGRFAMs; TIGR00231; small_GTP; 1.
DR PROSITE; PS51722; G_TR_2; 1.
DR PROSITE; PS01176; IF2; 1.
PE 3: Inferred from homology;
KW GTP-binding; Initiation factor; Nucleotide-binding; Protein biosynthesis;
KW Reference proteome.
FT CHAIN 1..591
FT /note="Probable translation initiation factor IF-2"
FT /id="PRO_0000137303"
FT DOMAIN 7..223
FT /note="tr-type G"
FT REGION 16..23
FT /note="G1"
FT /evidence="ECO:0000250"
FT REGION 41..45
FT /note="G2"
FT /evidence="ECO:0000250"
FT REGION 78..81
FT /note="G3"
FT /evidence="ECO:0000250"
FT REGION 132..135
FT /note="G4"
FT /evidence="ECO:0000250"
FT REGION 200..202
FT /note="G5"
FT /evidence="ECO:0000250"
FT BINDING 16..23
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 78..82
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 132..135
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
SQ SEQUENCE 591 AA; 64901 MW; FE328265BBD887DF CRC64;
MTDKKNLRTP IVCVMGHVDH GKTTLLDKIR GTAIVSGEAG AITQHIGATE VPIDVIIDKL
GDPRLRDRFM VPGLLFIDTP GHHAFTTLRS RGGALADLAI VVVDINEGFK PQTYESLQIL
KRFKTPFVVV ANKIDRIGGW VSQKDMPFAA TFKKQSSDVQ ARLETKLYEV IGELYNQGFA
AERYDRVTNF QKTLGVVPVS AFTGEGIPDV LMVLLGLAQK FLEANLQYSA KGPGVGTVLE
VKEEKGLGAT LDIILYDGTL KKGDTVVIGS LGEPIRTKVR ALLKPRELSE IRYESKFQQV
SKVTAAAGVK ISAPGLEGAL AGSPIRVATE DNLEEIASQV KSEIDEVRID TGSVGIMIKA
DTLGSLEALV HEFQKDEVPI RKAEVGDISH RDAVEASTVE DPLYSVIIGF NVKVHPDARD
FLQESSVKVF TSDVIYRLVE DYQKYVKEQQ EKAEKKIFET IIRPGKFKIL PGCVFRQSKP
AVVGVRVLGG VVRTNTDVML ENGNVVGKIK GLQSEGENIP SAKVGKEVAM AIEGATVGRQ
IKEEDVLYVN VPERHAKVLE HEIYESLSTD EKETLDIFLT LKRKDNPFWA K