IF2P_METS3
ID IF2P_METS3 Reviewed; 596 AA.
AC A5UJM9;
DT 20-MAY-2008, integrated into UniProtKB/Swiss-Prot.
DT 10-JUL-2007, sequence version 1.
DT 03-AUG-2022, entry version 87.
DE RecName: Full=Probable translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100};
GN Name=infB {ECO:0000255|HAMAP-Rule:MF_00100}; OrderedLocusNames=Msm_0202;
OS Methanobrevibacter smithii (strain ATCC 35061 / DSM 861 / OCM 144 / PS).
OC Archaea; Euryarchaeota; Methanomada group; Methanobacteria;
OC Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.
OX NCBI_TaxID=420247;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 35061 / DSM 861 / OCM 144 / PS;
RX PubMed=17563350; DOI=10.1073/pnas.0704189104;
RA Samuel B.S., Hansen E.E., Manchester J.K., Coutinho P.M., Henrissat B.,
RA Fulton R., Latreille P., Kim K., Wilson R.K., Gordon J.I.;
RT "Genomic and metabolic adaptations of Methanobrevibacter smithii to the
RT human gut.";
RL Proc. Natl. Acad. Sci. U.S.A. 104:10643-10648(2007).
CC -!- FUNCTION: Function in general translation initiation by promoting the
CC binding of the formylmethionine-tRNA to ribosomes. Seems to function
CC along with eIF-2. {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SIMILARITY: Belongs to the TRAFAC class translation factor GTPase
CC superfamily. Classic translation factor GTPase family. IF-2 subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_00100}.
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DR EMBL; CP000678; ABQ86407.1; -; Genomic_DNA.
DR RefSeq; WP_011953751.1; NC_009515.1.
DR AlphaFoldDB; A5UJM9; -.
DR SMR; A5UJM9; -.
DR STRING; 420247.Msm_0202; -.
DR EnsemblBacteria; ABQ86407; ABQ86407; Msm_0202.
DR GeneID; 5215790; -.
DR KEGG; msi:Msm_0202; -.
DR PATRIC; fig|420247.28.peg.206; -.
DR eggNOG; arCOG01560; Archaea.
DR HOGENOM; CLU_002656_3_3_2; -.
DR OMA; FRQSKPA; -.
DR Proteomes; UP000001992; Chromosome.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-UniRule.
DR Gene3D; 3.40.50.10050; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_00100_A; IF_2_A; 1.
DR InterPro; IPR004161; EFTu-like_2.
DR InterPro; IPR029459; EFTU-type.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR004544; TF_aIF-2_arc.
DR InterPro; IPR015760; TIF_IF2.
DR InterPro; IPR023115; TIF_IF2_dom3.
DR InterPro; IPR036925; TIF_IF2_dom3_sf.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR PANTHER; PTHR43381; PTHR43381; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF03144; GTP_EFTU_D2; 1.
DR Pfam; PF14578; GTP_EFTU_D4; 1.
DR Pfam; PF11987; IF-2; 1.
DR PRINTS; PR00315; ELONGATNFCT.
DR SUPFAM; SSF50447; SSF50447; 1.
DR SUPFAM; SSF52156; SSF52156; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00491; aIF-2; 1.
DR TIGRFAMs; TIGR00231; small_GTP; 1.
DR PROSITE; PS51722; G_TR_2; 1.
PE 3: Inferred from homology;
KW GTP-binding; Initiation factor; Nucleotide-binding; Protein biosynthesis.
FT CHAIN 1..596
FT /note="Probable translation initiation factor IF-2"
FT /id="PRO_0000335526"
FT DOMAIN 3..220
FT /note="tr-type G"
FT REGION 12..19
FT /note="G1"
FT /evidence="ECO:0000250"
FT REGION 37..41
FT /note="G2"
FT /evidence="ECO:0000250"
FT REGION 76..79
FT /note="G3"
FT /evidence="ECO:0000250"
FT REGION 130..133
FT /note="G4"
FT /evidence="ECO:0000250"
FT REGION 198..200
FT /note="G5"
FT /evidence="ECO:0000250"
FT BINDING 12..19
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 76..80
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 130..133
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
SQ SEQUENCE 596 AA; 66426 MW; 0623E35109CEE41D CRC64;
MKIRSPIVSV LGHVDHGKTT LLDYIRGSTI AAKEAGGITQ HIGATEIPND TIENICGDFI
SKLAIKDLIP GLFFIDTPGH AAFTSLRKRG GALADLAVLI LDVNDGFKPQ TYEALNILKM
YKTPFIVVAN KIDRLFGWEV HEGASFRETF SNQAKSVQQD LDNKIYEIVG ELHKEGFQSE
RFDRVSNFAS QISIIPISAK TGEGVIEVLA MLLGLAQEYL TEQLEIDENA PAKGTVLEIK
EETGLGVTLD AIIYDGVLRT NDEIALMLSS EDVLVTKIRS ILRPLPLEEM RDSKKKFRKL
DEVVAAAGIK VAAPHLDDVV SGSPLRVLSE DTDVEQEILN EIDNITIDTE DEGILVKADT
IGSLEAVVKL LREMDIPIRA ADIGDVNRRD IINSSIAYDE NELHGAIIAF NVDVHPNSEE
DLNNSEVKLF SGDVIYQILE EYEEWVKQKQ EDKKKSFYDA IIKPAKFVSL PKLVFRQSKP
AIIGIESLSG TLKQGQQLIN KDGHVVGSIA SMEDKGETLP DISRGQRVAM AIKDAIVGKD
FEEGDELYVD IPEKHYKYIE REFKDKLTED EFETLYEFLE IKRKQDSDWG SFGLFE