IF2P_PYRAR
ID IF2P_PYRAR Reviewed; 592 AA.
AC A4WIK2;
DT 20-MAY-2008, integrated into UniProtKB/Swiss-Prot.
DT 29-MAY-2007, sequence version 1.
DT 03-AUG-2022, entry version 88.
DE RecName: Full=Probable translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100};
GN Name=infB {ECO:0000255|HAMAP-Rule:MF_00100}; OrderedLocusNames=Pars_0628;
OS Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321 / PZ6).
OC Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae;
OC Pyrobaculum.
OX NCBI_TaxID=340102;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700994 / DSM 13514 / JCM 11321 / PZ6;
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E.,
RA Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Cozen A.E.,
RA Fitz-Gibbon S.T., House C.H., Saltikov C., Lowe T.M., Richardson P.;
RT "Complete sequence of Pyrobaculum arsenaticum DSM 13514.";
RL Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Function in general translation initiation by promoting the
CC binding of the formylmethionine-tRNA to ribosomes. Seems to function
CC along with eIF-2. {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SIMILARITY: Belongs to the TRAFAC class translation factor GTPase
CC superfamily. Classic translation factor GTPase family. IF-2 subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_00100}.
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DR EMBL; CP000660; ABP50219.1; -; Genomic_DNA.
DR AlphaFoldDB; A4WIK2; -.
DR SMR; A4WIK2; -.
DR STRING; 340102.Pars_0628; -.
DR EnsemblBacteria; ABP50219; ABP50219; Pars_0628.
DR KEGG; pas:Pars_0628; -.
DR HOGENOM; CLU_002656_3_3_2; -.
DR OMA; FRQSKPA; -.
DR PhylomeDB; A4WIK2; -.
DR Proteomes; UP000001567; Chromosome.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-UniRule.
DR Gene3D; 3.40.50.10050; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_00100_A; IF_2_A; 1.
DR InterPro; IPR004161; EFTu-like_2.
DR InterPro; IPR029459; EFTU-type.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR004544; TF_aIF-2_arc.
DR InterPro; IPR015760; TIF_IF2.
DR InterPro; IPR023115; TIF_IF2_dom3.
DR InterPro; IPR036925; TIF_IF2_dom3_sf.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR PANTHER; PTHR43381; PTHR43381; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF03144; GTP_EFTU_D2; 1.
DR Pfam; PF14578; GTP_EFTU_D4; 1.
DR Pfam; PF11987; IF-2; 1.
DR PRINTS; PR00315; ELONGATNFCT.
DR SUPFAM; SSF50447; SSF50447; 1.
DR SUPFAM; SSF52156; SSF52156; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00491; aIF-2; 1.
DR TIGRFAMs; TIGR00231; small_GTP; 1.
DR PROSITE; PS51722; G_TR_2; 1.
PE 3: Inferred from homology;
KW GTP-binding; Initiation factor; Nucleotide-binding; Protein biosynthesis.
FT CHAIN 1..592
FT /note="Probable translation initiation factor IF-2"
FT /id="PRO_0000335532"
FT DOMAIN 4..225
FT /note="tr-type G"
FT REGION 13..20
FT /note="G1"
FT /evidence="ECO:0000250"
FT REGION 38..42
FT /note="G2"
FT /evidence="ECO:0000250"
FT REGION 79..82
FT /note="G3"
FT /evidence="ECO:0000250"
FT REGION 133..136
FT /note="G4"
FT /evidence="ECO:0000250"
FT REGION 201..203
FT /note="G5"
FT /evidence="ECO:0000250"
FT BINDING 13..20
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 79..83
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 133..136
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
SQ SEQUENCE 592 AA; 65538 MW; 8F2A870456649E98 CRC64;
MAGVRSPFVV VMGHVDVGKT LLLDKIRGTS VAYREPGMIT QHIGMSFVPW QAVEKFSGPL
VDRLRLRGRI WIPGFLFIDT PGHAAFSNLR KRGGSVADLA ILVVDITSGL EDQGVESLKL
IQSRGVPFVI AANKLDRIYG WKSVENRPFL FAVEDQEWHA VATLEERIGK LIEELSKFGI
EADRYDRVRD FTKQVPIVPT SAVTGEGIAD LLLVLAGVSQ RFIPKEKLQV GEGPARGVVM
EVKEERGLGV VADAIIYDGR LRKGDVVVTA GLEGPKEAKV RMLIMPKPLE EMRDPEDRFM
AVEEVKAAAG VRIVADGLEG VVAGAPLLAV WSLQDLPNAR RLVGEEISEI KIESDREGVI
VRADTFGTLE STVLFLRQQG VPVRKADVGP PTHKDVVEAV LSRRKNPAFG VILAFNVKIP
PDVEKEATSS GIKIIRGEIL YRIFDEYLKW SQEVKTKTIE QILSQLTRPG KIQILPGFVF
RRSDPVIVGV KVLAGTIKPG VTLVKDGREV GKIMQIQKQG KPVNEAAVGD EVAISIQGDV
MVGRQIKEGD VLYVYVPDEQ AREWLFKYKQ YLRDDEKKAL EEFLKTRKSA HQ