IF2P_PYRCJ
ID IF2P_PYRCJ Reviewed; 592 AA.
AC A3MTU7;
DT 20-MAY-2008, integrated into UniProtKB/Swiss-Prot.
DT 03-APR-2007, sequence version 1.
DT 03-AUG-2022, entry version 88.
DE RecName: Full=Probable translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100};
GN Name=infB {ECO:0000255|HAMAP-Rule:MF_00100}; OrderedLocusNames=Pcal_0638;
OS Pyrobaculum calidifontis (strain DSM 21063 / JCM 11548 / VA1).
OC Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae;
OC Pyrobaculum.
OX NCBI_TaxID=410359;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 21063 / JCM 11548 / VA1;
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E.,
RA Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Cozen A.E.,
RA Fitz-Gibbon S.T., House C.H., Saltikov C., Lowe T.M., Richardson P.;
RT "Complete sequence of Pyrobaculum calidifontis JCM 11548.";
RL Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Function in general translation initiation by promoting the
CC binding of the formylmethionine-tRNA to ribosomes. Seems to function
CC along with eIF-2. {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SIMILARITY: Belongs to the TRAFAC class translation factor GTPase
CC superfamily. Classic translation factor GTPase family. IF-2 subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_00100}.
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DR EMBL; CP000561; ABO08064.1; -; Genomic_DNA.
DR AlphaFoldDB; A3MTU7; -.
DR SMR; A3MTU7; -.
DR STRING; 410359.Pcal_0638; -.
DR EnsemblBacteria; ABO08064; ABO08064; Pcal_0638.
DR KEGG; pcl:Pcal_0638; -.
DR eggNOG; arCOG01560; Archaea.
DR HOGENOM; CLU_002656_3_3_2; -.
DR OMA; FRQSKPA; -.
DR Proteomes; UP000001431; Chromosome.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-UniRule.
DR Gene3D; 3.40.50.10050; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_00100_A; IF_2_A; 1.
DR InterPro; IPR004161; EFTu-like_2.
DR InterPro; IPR029459; EFTU-type.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR004544; TF_aIF-2_arc.
DR InterPro; IPR015760; TIF_IF2.
DR InterPro; IPR023115; TIF_IF2_dom3.
DR InterPro; IPR036925; TIF_IF2_dom3_sf.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR PANTHER; PTHR43381; PTHR43381; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF03144; GTP_EFTU_D2; 1.
DR Pfam; PF14578; GTP_EFTU_D4; 1.
DR Pfam; PF11987; IF-2; 1.
DR PRINTS; PR00315; ELONGATNFCT.
DR SUPFAM; SSF50447; SSF50447; 1.
DR SUPFAM; SSF52156; SSF52156; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00491; aIF-2; 1.
DR TIGRFAMs; TIGR00231; small_GTP; 1.
DR PROSITE; PS51722; G_TR_2; 1.
PE 3: Inferred from homology;
KW GTP-binding; Initiation factor; Nucleotide-binding; Protein biosynthesis.
FT CHAIN 1..592
FT /note="Probable translation initiation factor IF-2"
FT /id="PRO_0000335533"
FT DOMAIN 5..226
FT /note="tr-type G"
FT REGION 14..21
FT /note="G1"
FT /evidence="ECO:0000250"
FT REGION 39..43
FT /note="G2"
FT /evidence="ECO:0000250"
FT REGION 80..83
FT /note="G3"
FT /evidence="ECO:0000250"
FT REGION 134..137
FT /note="G4"
FT /evidence="ECO:0000250"
FT REGION 202..204
FT /note="G5"
FT /evidence="ECO:0000250"
FT BINDING 14..21
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 80..84
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 134..137
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
SQ SEQUENCE 592 AA; 65291 MW; 5B7A4F3545646AD1 CRC64;
MQQKIRSPFV VVMGHVDVGK TLLLDKIRGT SVAYREPGMI TQHIGMSLVP WPAVEKFAGP
LVDRLKLRGR IWIPGFLFID TPGHAAFSNL RKRGGSVADL AILVVDITSG LEDQGVESLK
LIQSRGVPFV IAANKLDRIY GWKSVENRPF LFAVEEQEWH AVATLEEQIG KLITQLANLG
IDADRYDRVR DFSKQVPIVP TSAVTGEGVA DLLLVLAGVS QRFIPREKLQ VRDGPARGVV
MEVKEERGLG VVADVILYDG KLRKGDVIVT AGLDGSRQAK VRMLIMPKSL EEMRDPEDKF
MAVQEVEAAA GVRVVAEGLE GVVAGAPLLA VWDPKDLPEA LKSVGEEIAE IKIESDKEGV
IVRADTFGTL ESIILFLRQQ GVPVRKADVG PPTHKDVVEA VLSRRKNPAY GAILAFNVKV
PPEVETEAQS SGVKIIRGEI LYRIFDEYVK WSTEVKTKTV EQVLSQLTRP AKIQILPGYV
FRRSDPAIVG VKVLAGTLKP GVTLAKDGRE VGKVMQIQRQ GKPVAEAVAG DEVAISIQGD
VIVGRQIKEG DVLYVYIPDE QARQWLFRYK QYLRKDEVEA LEEYLKTRKK SA