IF2P_PYRIL
ID IF2P_PYRIL Reviewed; 588 AA.
AC A1RUX2;
DT 20-MAY-2008, integrated into UniProtKB/Swiss-Prot.
DT 06-FEB-2007, sequence version 1.
DT 03-AUG-2022, entry version 85.
DE RecName: Full=Probable translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100};
GN Name=infB {ECO:0000255|HAMAP-Rule:MF_00100}; OrderedLocusNames=Pisl_1600;
OS Pyrobaculum islandicum (strain DSM 4184 / JCM 9189 / GEO3).
OC Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae;
OC Pyrobaculum.
OX NCBI_TaxID=384616;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 4184 / JCM 9189 / GEO3;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Dalin E., Tice H., Pitluck S., Meincke L., Brettin T.,
RA Bruce D., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M.,
RA Hauser L., Kyrpides N., Mikhailova N., Lowe T., Richardson P.;
RT "Complete sequence of Pyrobaculum islandicum DSM 4184.";
RL Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Function in general translation initiation by promoting the
CC binding of the formylmethionine-tRNA to ribosomes. Seems to function
CC along with eIF-2. {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SIMILARITY: Belongs to the TRAFAC class translation factor GTPase
CC superfamily. Classic translation factor GTPase family. IF-2 subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_00100}.
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DR EMBL; CP000504; ABL88754.1; -; Genomic_DNA.
DR AlphaFoldDB; A1RUX2; -.
DR SMR; A1RUX2; -.
DR STRING; 384616.Pisl_1600; -.
DR EnsemblBacteria; ABL88754; ABL88754; Pisl_1600.
DR KEGG; pis:Pisl_1600; -.
DR eggNOG; arCOG01560; Archaea.
DR HOGENOM; CLU_002656_3_3_2; -.
DR OMA; FRQSKPA; -.
DR Proteomes; UP000002595; Chromosome.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-UniRule.
DR Gene3D; 3.40.50.10050; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_00100_A; IF_2_A; 1.
DR InterPro; IPR004161; EFTu-like_2.
DR InterPro; IPR029459; EFTU-type.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR004544; TF_aIF-2_arc.
DR InterPro; IPR015760; TIF_IF2.
DR InterPro; IPR023115; TIF_IF2_dom3.
DR InterPro; IPR036925; TIF_IF2_dom3_sf.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR PANTHER; PTHR43381; PTHR43381; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF03144; GTP_EFTU_D2; 1.
DR Pfam; PF14578; GTP_EFTU_D4; 1.
DR Pfam; PF11987; IF-2; 1.
DR PRINTS; PR00315; ELONGATNFCT.
DR SUPFAM; SSF50447; SSF50447; 1.
DR SUPFAM; SSF52156; SSF52156; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00491; aIF-2; 1.
DR TIGRFAMs; TIGR00231; small_GTP; 1.
DR PROSITE; PS51722; G_TR_2; 1.
PE 3: Inferred from homology;
KW GTP-binding; Initiation factor; Nucleotide-binding; Protein biosynthesis.
FT CHAIN 1..588
FT /note="Probable translation initiation factor IF-2"
FT /id="PRO_0000335534"
FT DOMAIN 3..224
FT /note="tr-type G"
FT REGION 12..19
FT /note="G1"
FT /evidence="ECO:0000250"
FT REGION 37..41
FT /note="G2"
FT /evidence="ECO:0000250"
FT REGION 78..81
FT /note="G3"
FT /evidence="ECO:0000250"
FT REGION 132..135
FT /note="G4"
FT /evidence="ECO:0000250"
FT REGION 200..202
FT /note="G5"
FT /evidence="ECO:0000250"
FT BINDING 12..19
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 78..82
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 132..135
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
SQ SEQUENCE 588 AA; 65595 MW; 8DB98CADB65380B2 CRC64;
MSIRSPFVVV MGHVDVGKTL LLDKIRGTSV AYREPGMITQ HIGVSFVPWQ AVERFAGPLV
DKLRLRGKIW IPGFLFIDTP GHAAFSNLRR RGGSVADLAI LVVDITSGLE EQGVESLKLI
QSRGVPFIIA ANKLDRIYGW KSVENRPFLF AVEQQEWHAI ATLEEAIGKL IDQLSRFGIE
ADRYDRVRDF SKQVPIVPTS AVTGEGIADL LLVLAGVSQR FIPREKLSVS YGPAKGVVME
VKEERGLGVV ADVILYDGVL KKGDVIITAG IDGPKETKVR MLIMPKPLDE MRDPEDRYMA
VEEVKAAAGV RIVADGLDGV VAGAPIFAVW DLQDIQKVVQ LVREEISEIK IETDREGVIA
RADTFGTLES MVLFLRQQGV PIRRADVGPP THKDVVEAVL SRRKNPTYGV ILAFNVKIPP
EVEREAMSSG IKIIRGEILY RIFDEYIKWS QEVKTKTIEQ ILSQMTKPGK IQILPGYVFR
RSNPAIVGIK VLAGTIKPGV TLVKDGKEVG RIMQIQKSGK PINEAVVGDE VAISIHGDII
VGRQIREGDV LYVYVPDEQI RQWLFQYRQY LRDDELKALE EYLKLRKR