IF2P_THEPD
ID IF2P_THEPD Reviewed; 601 AA.
AC A1RXH6;
DT 20-MAY-2008, integrated into UniProtKB/Swiss-Prot.
DT 06-FEB-2007, sequence version 1.
DT 03-AUG-2022, entry version 91.
DE RecName: Full=Probable translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100};
GN Name=infB {ECO:0000255|HAMAP-Rule:MF_00100}; OrderedLocusNames=Tpen_0499;
OS Thermofilum pendens (strain DSM 2475 / Hrk 5).
OC Archaea; Crenarchaeota; Thermoprotei; Thermofilales; Thermofilaceae;
OC Thermofilum.
OX NCBI_TaxID=368408;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 2475 / Hrk 5;
RX PubMed=18263724; DOI=10.1128/jb.01949-07;
RA Anderson I., Rodriguez J., Susanti D., Porat I., Reich C., Ulrich L.E.,
RA Elkins J.G., Mavromatis K., Lykidis A., Kim E., Thompson L.S., Nolan M.,
RA Land M., Copeland A., Lapidus A., Lucas S., Detter C., Zhulin I.B.,
RA Olsen G.J., Whitman W., Mukhopadhyay B., Bristow J., Kyrpides N.;
RT "Genome sequence of Thermofilum pendens reveals an exceptional loss of
RT biosynthetic pathways without genome reduction.";
RL J. Bacteriol. 190:2957-2965(2008).
CC -!- FUNCTION: Function in general translation initiation by promoting the
CC binding of the formylmethionine-tRNA to ribosomes. Seems to function
CC along with eIF-2. {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SIMILARITY: Belongs to the TRAFAC class translation factor GTPase
CC superfamily. Classic translation factor GTPase family. IF-2 subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_00100}.
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DR EMBL; CP000505; ABL77906.1; -; Genomic_DNA.
DR RefSeq; WP_011752171.1; NC_008698.1.
DR AlphaFoldDB; A1RXH6; -.
DR SMR; A1RXH6; -.
DR STRING; 368408.Tpen_0499; -.
DR PRIDE; A1RXH6; -.
DR EnsemblBacteria; ABL77906; ABL77906; Tpen_0499.
DR GeneID; 4601333; -.
DR KEGG; tpe:Tpen_0499; -.
DR eggNOG; arCOG01560; Archaea.
DR HOGENOM; CLU_002656_3_3_2; -.
DR OMA; FRQSKPA; -.
DR OrthoDB; 17053at2157; -.
DR Proteomes; UP000000641; Chromosome.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-UniRule.
DR Gene3D; 3.40.50.10050; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_00100_A; IF_2_A; 1.
DR InterPro; IPR004161; EFTu-like_2.
DR InterPro; IPR029459; EFTU-type.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR004544; TF_aIF-2_arc.
DR InterPro; IPR015760; TIF_IF2.
DR InterPro; IPR023115; TIF_IF2_dom3.
DR InterPro; IPR036925; TIF_IF2_dom3_sf.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR PANTHER; PTHR43381; PTHR43381; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF03144; GTP_EFTU_D2; 1.
DR Pfam; PF14578; GTP_EFTU_D4; 1.
DR Pfam; PF11987; IF-2; 1.
DR PRINTS; PR00315; ELONGATNFCT.
DR SUPFAM; SSF50447; SSF50447; 1.
DR SUPFAM; SSF52156; SSF52156; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00491; aIF-2; 1.
DR TIGRFAMs; TIGR00231; small_GTP; 1.
DR PROSITE; PS51722; G_TR_2; 1.
PE 3: Inferred from homology;
KW GTP-binding; Initiation factor; Nucleotide-binding; Protein biosynthesis;
KW Reference proteome.
FT CHAIN 1..601
FT /note="Probable translation initiation factor IF-2"
FT /id="PRO_0000335536"
FT DOMAIN 10..227
FT /note="tr-type G"
FT REGION 19..26
FT /note="G1"
FT /evidence="ECO:0000250"
FT REGION 44..48
FT /note="G2"
FT /evidence="ECO:0000250"
FT REGION 83..86
FT /note="G3"
FT /evidence="ECO:0000250"
FT REGION 137..140
FT /note="G4"
FT /evidence="ECO:0000250"
FT REGION 205..207
FT /note="G5"
FT /evidence="ECO:0000250"
FT BINDING 19..26
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 83..87
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 137..140
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
SQ SEQUENCE 601 AA; 66557 MW; 997A90B8660B15B3 CRC64;
MSNDQGSQFL RAPIVVVLGH VDAGKTTLLD KIRGTAVAKR EPGTMTQHIG ASFLPWKALE
AVCGSLVSQI RAEVVIPGFL VIDTPGHEAF SNLRRRGGSI ADIAILVVDV LRGLEQQTFE
SIDILRERKV PFIVAVNKID KIPGWKSFPN TPFVESVKRQ SEAAQLKLEE LLSYIIQQFA
SLGFRSDRYD RIRDFTRVLA LVPVSAVTGE GIPDLLLVLA GLAQRYLKGR LLASIAPGKG
VILELKEEAG LGMTATLILY DGVIRRGDIV VTGGIEGAFS TRVRALLMPK PLDEMRSPED
RFLEVERIVA AAGVKLVAEG LEKAVPGAPL FVAVSEEEVG RLKQLVEEEI SGVKFERDVV
GVVVKADTLG TLEALVGYLK KQGIPIRVAD IGPVVKRDVV QASMVKEKDP LYAAILAFNV
KILPEAQDEA ARHGIPVFQE RIMYKLVENY QKWLQETRDA EVRKAFEKIT PPAVVQILPG
YVFRRRDPII VGVRVVCGRI RSGVPLITKD GREIGEIMQI KEHDKVLDVV SEGAEVAISI
RSKAIVGRQV KEGDYLYSNL SIEEINRLLE KYEKYLAENE KSYLRKLMRF KMGLSKEIEY
P