IF2P_THESM
ID IF2P_THESM Reviewed; 597 AA.
AC C6A1V3;
DT 22-SEP-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-SEP-2009, sequence version 1.
DT 03-AUG-2022, entry version 81.
DE RecName: Full=Probable translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100};
GN Name=infB {ECO:0000255|HAMAP-Rule:MF_00100}; OrderedLocusNames=TSIB_0532;
OS Thermococcus sibiricus (strain DSM 12597 / MM 739).
OC Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae;
OC Thermococcus.
OX NCBI_TaxID=604354;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 12597 / MM 739;
RX PubMed=19447963; DOI=10.1128/aem.00718-09;
RA Mardanov A.V., Ravin N.V., Svetlitchnyi V.A., Beletsky A.V.,
RA Miroshnichenko M.L., Bonch-Osmolovskaya E.A., Skryabin K.G.;
RT "Metabolic versatility and indigenous origin of the archaeon Thermococcus
RT sibiricus, isolated from a siberian oil reservoir, as revealed by genome
RT analysis.";
RL Appl. Environ. Microbiol. 75:4580-4588(2009).
CC -!- FUNCTION: Function in general translation initiation by promoting the
CC binding of the formylmethionine-tRNA to ribosomes. Seems to function
CC along with eIF-2. {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SIMILARITY: Belongs to the TRAFAC class translation factor GTPase
CC superfamily. Classic translation factor GTPase family. IF-2 subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_00100}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CP001463; ACS89598.1; -; Genomic_DNA.
DR RefSeq; WP_015848818.1; NC_012883.1.
DR AlphaFoldDB; C6A1V3; -.
DR SMR; C6A1V3; -.
DR STRING; 604354.TSIB_0532; -.
DR PRIDE; C6A1V3; -.
DR EnsemblBacteria; ACS89598; ACS89598; TSIB_0532.
DR GeneID; 8095520; -.
DR KEGG; tsi:TSIB_0532; -.
DR eggNOG; arCOG01560; Archaea.
DR HOGENOM; CLU_002656_3_3_2; -.
DR OMA; FRQSKPA; -.
DR OrthoDB; 17053at2157; -.
DR Proteomes; UP000009079; Chromosome.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-UniRule.
DR Gene3D; 3.40.50.10050; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_00100_A; IF_2_A; 1.
DR InterPro; IPR004161; EFTu-like_2.
DR InterPro; IPR029459; EFTU-type.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR004544; TF_aIF-2_arc.
DR InterPro; IPR015760; TIF_IF2.
DR InterPro; IPR023115; TIF_IF2_dom3.
DR InterPro; IPR036925; TIF_IF2_dom3_sf.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR PANTHER; PTHR43381; PTHR43381; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF03144; GTP_EFTU_D2; 1.
DR Pfam; PF14578; GTP_EFTU_D4; 1.
DR Pfam; PF11987; IF-2; 1.
DR PRINTS; PR00315; ELONGATNFCT.
DR SUPFAM; SSF50447; SSF50447; 1.
DR SUPFAM; SSF52156; SSF52156; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00491; aIF-2; 1.
DR TIGRFAMs; TIGR00231; small_GTP; 1.
DR PROSITE; PS51722; G_TR_2; 1.
PE 3: Inferred from homology;
KW GTP-binding; Initiation factor; Nucleotide-binding; Protein biosynthesis;
KW Reference proteome.
FT CHAIN 1..597
FT /note="Probable translation initiation factor IF-2"
FT /id="PRO_1000202786"
FT DOMAIN 4..221
FT /note="tr-type G"
FT REGION 13..20
FT /note="G1"
FT /evidence="ECO:0000250"
FT REGION 38..42
FT /note="G2"
FT /evidence="ECO:0000250"
FT REGION 77..80
FT /note="G3"
FT /evidence="ECO:0000250"
FT REGION 131..134
FT /note="G4"
FT /evidence="ECO:0000250"
FT REGION 199..201
FT /note="G5"
FT /evidence="ECO:0000250"
FT BINDING 13..20
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 77..81
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 131..134
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
SQ SEQUENCE 597 AA; 66657 MW; DA6561DBF2D08163 CRC64;
MKKIRQPIIA VLGHVDHGKT SLLDRIRNTH VAEKEAGGIT QHIGATEVPI DVVKQLAGPL
LSLWKGEIKL PGLLFIDTPG HEAFTSLRAR GGSLADLAIL IIDVNEGFQP QTLESIEILR
KYKTPFVVAA NKIDRIKGWK VVENEPFLVN IKKQDQRAQQ DLETKLWELI GKFYELGFQV
NRFDRVKDFR KELAIIPISA KYGIGVPELL VLISGLAQKY LEEKLKIEVE GPARGTILEV
REEIGFGTTI DVIIYDGTLR KDDTIVVGGK DKAIVTKIRA LLKPKPLDEI RDPRYKFDHV
NEVSASAGIK IAAPDLEEAL AGSPVIAVRD EEELKRARRE ILEQIKSVII STDKVGVIVK
ADTIGSLEAL SKELHEKNIP IRKADVGNIS KTDVMEALSV KEEEPFYGVV IGFNVKVNED
AEEVAKAKNI PLFVNNIIYK LIEDYEAWIK AEEEKKKKEI LANTKFPGVI KLFPDERYVF
RRSHPAIVGI EVLEGRIKPG YPLIKQNGDK VGVIKSIKSK EDFLQEAKKG DQVAVAIEGA
IVGRHIHPGE ILYVDISKDD AIRLVKELRD MLDDTDIEAL KNTAKVKAQK DPFWGAL