IF2_ALBFT
ID IF2_ALBFT Reviewed; 978 AA.
AC Q21WJ5;
DT 15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT 18-APR-2006, sequence version 1.
DT 03-AUG-2022, entry version 107.
DE RecName: Full=Translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100};
GN Name=infB {ECO:0000255|HAMAP-Rule:MF_00100}; OrderedLocusNames=Rfer_2134;
OS Albidiferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118)
OS (Rhodoferax ferrireducens).
OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Rhodoferax.
OX NCBI_TaxID=338969;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-621 / DSM 15236 / T118;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D.,
RA Han C., Tapia R., Gilna P., Kiss H., Schmutz J., Larimer F., Land M.,
RA Kyrpides N., Ivanova N., Richardson P.;
RT "Complete sequence of chromosome of Rhodoferax ferrireducens DSM 15236.";
RL Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: One of the essential components for the initiation of protein
CC synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis
CC and promotes its binding to the 30S ribosomal subunits. Also involved
CC in the hydrolysis of GTP during the formation of the 70S ribosomal
CC complex. {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SIMILARITY: Belongs to the TRAFAC class translation factor GTPase
CC superfamily. Classic translation factor GTPase family. IF-2 subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_00100}.
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DR EMBL; CP000267; ABD69858.1; -; Genomic_DNA.
DR RefSeq; WP_011464426.1; NC_007908.1.
DR AlphaFoldDB; Q21WJ5; -.
DR SMR; Q21WJ5; -.
DR STRING; 338969.Rfer_2134; -.
DR PRIDE; Q21WJ5; -.
DR EnsemblBacteria; ABD69858; ABD69858; Rfer_2134.
DR KEGG; rfr:Rfer_2134; -.
DR eggNOG; COG0532; Bacteria.
DR HOGENOM; CLU_006301_6_0_4; -.
DR OMA; RDVMMAG; -.
DR OrthoDB; 347113at2; -.
DR Proteomes; UP000008332; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-UniRule.
DR CDD; cd03702; IF2_mtIF2_II; 1.
DR Gene3D; 3.40.50.10050; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_00100_B; IF_2_B; 1.
DR InterPro; IPR009061; DNA-bd_dom_put_sf.
DR InterPro; IPR013575; IF2_assoc_dom_bac.
DR InterPro; IPR044145; IF2_II.
DR InterPro; IPR006847; IF2_N.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR000178; TF_IF2_bacterial-like.
DR InterPro; IPR015760; TIF_IF2.
DR InterPro; IPR023115; TIF_IF2_dom3.
DR InterPro; IPR036925; TIF_IF2_dom3_sf.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR PANTHER; PTHR43381; PTHR43381; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF11987; IF-2; 1.
DR Pfam; PF08364; IF2_assoc; 1.
DR Pfam; PF04760; IF2_N; 2.
DR SUPFAM; SSF46955; SSF46955; 1.
DR SUPFAM; SSF50447; SSF50447; 2.
DR SUPFAM; SSF52156; SSF52156; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00487; IF-2; 1.
DR TIGRFAMs; TIGR00231; small_GTP; 1.
DR PROSITE; PS51722; G_TR_2; 1.
DR PROSITE; PS01176; IF2; 1.
PE 3: Inferred from homology;
KW Cytoplasm; GTP-binding; Initiation factor; Nucleotide-binding;
KW Protein biosynthesis; Reference proteome.
FT CHAIN 1..978
FT /note="Translation initiation factor IF-2"
FT /id="PRO_1000008313"
FT DOMAIN 478..647
FT /note="tr-type G"
FT REGION 107..129
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 146..387
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 487..494
FT /note="G1"
FT /evidence="ECO:0000250"
FT REGION 512..516
FT /note="G2"
FT /evidence="ECO:0000250"
FT REGION 533..536
FT /note="G3"
FT /evidence="ECO:0000250"
FT REGION 587..590
FT /note="G4"
FT /evidence="ECO:0000250"
FT REGION 623..625
FT /note="G5"
FT /evidence="ECO:0000250"
FT COMPBIAS 146..170
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 211..261
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 372..387
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 487..494
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 533..537
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 587..590
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
SQ SEQUENCE 978 AA; 105183 MW; A0FB3EB46A83A065 CRC64;
MFSTTVAEFA NELKKSTATL LEQLKSAGVA KTAASDKLND ADKQRLLSYL QSTHGAAGAE
RKKITLVKKS TTEIKQADAS GKARTIQVEV RKKRTFIRRD DGVEVSAEAP ALETEQEVEA
APQVDNLELA RREEEARRQA ELIRRQEEEL SERRRQREEQ EARSREASEK AAAVAAEAAE
AAAAQALKKK SKPVAPEQPA PNPTEIETAK VLAAAEKEQH LAKEKGLARE KELAESKARA
AEDVVRAADL GDRRRKAESE AAAIRLMMSS PAKKAPPPPK KPEEVKPAMK GTLHKPAAGA
VPAKPAKPGA PGAPGAPAAG AAAGAGKEVK SAKLSSSWAG DPAKKKGIPT RGATAAPGAG
RSTNWRAPAR GGRRGSSDRD RDDHRVQAAP VEQRVIEVHV PETITVAELA HKMAVKASEV
IKHLMKLGQM VTINQPLDQD TAMILVEEMG HKAIVAALDD PEAFTVDEVS QQQSESLPRA
PVVTVMGHVD HGKTSLLDYI RRAKVATGEA GGITQHIGAY HVETDRGMIS FLDTPGHEAF
TAMRARGAKA TDIVILVVAA DDGVMPQTKE AIKHARAAGV PIVVAINKID KPDANPERVK
NELVVEEVVP EEFGGDSPFV PVSAKTGQGI DALLEQVLLQ AEVLELKAPV DAMAKGLVIE
AQLDKGRGPV ATVLVQSGTL KTGDIVLAGS TYGRVRAMLD ENGRTIKTAG PSIPVEIQGL
TEVPQAGDEF MVMADERRAR EIATYRAGKF RHTKLAKQQA AKLENMFTDM AAGEVKMVPI
IIKADVQGSQ EALAQSLLKL STDEVKVQLV YTAVGAISES DVNLAIASKA VIIGFNTRAD
AGARKLAENN GVDIRYYDII YDAVDELKLA MSGMLTPDKK EEVIGTAEIR QIFKVSKIGS
IAGCMVTAGV VRRTARLRLL RDNMVIFTGE LDSLKRFKDD VREVREGFDC GLNIKNYNDI
QEGDVLEFFE IREVARTL