IF2_ANAMM
ID IF2_ANAMM Reviewed; 832 AA.
AC Q5PAJ5;
DT 21-MAR-2006, integrated into UniProtKB/Swiss-Prot.
DT 04-JAN-2005, sequence version 1.
DT 03-AUG-2022, entry version 101.
DE RecName: Full=Translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100};
GN Name=infB {ECO:0000255|HAMAP-Rule:MF_00100}; OrderedLocusNames=AM735;
OS Anaplasma marginale (strain St. Maries).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales;
OC Anaplasmataceae; Anaplasma.
OX NCBI_TaxID=234826;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=St. Maries;
RX PubMed=15618402; DOI=10.1073/pnas.0406656102;
RA Brayton K.A., Kappmeyer L.S., Herndon D.R., Dark M.J., Tibbals D.L.,
RA Palmer G.H., McGuire T.C., Knowles D.P. Jr.;
RT "Complete genome sequencing of Anaplasma marginale reveals that the surface
RT is skewed to two superfamilies of outer membrane proteins.";
RL Proc. Natl. Acad. Sci. U.S.A. 102:844-849(2005).
CC -!- FUNCTION: One of the essential components for the initiation of protein
CC synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis
CC and promotes its binding to the 30S ribosomal subunits. Also involved
CC in the hydrolysis of GTP during the formation of the 70S ribosomal
CC complex. {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SIMILARITY: Belongs to the TRAFAC class translation factor GTPase
CC superfamily. Classic translation factor GTPase family. IF-2 subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_00100}.
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DR EMBL; CP000030; AAV86685.1; -; Genomic_DNA.
DR RefSeq; WP_011114409.1; NC_004842.2.
DR AlphaFoldDB; Q5PAJ5; -.
DR SMR; Q5PAJ5; -.
DR KEGG; ama:AM735; -.
DR HOGENOM; CLU_006301_10_2_5; -.
DR OMA; VIFAMNK; -.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-UniRule.
DR CDD; cd03702; IF2_mtIF2_II; 1.
DR Gene3D; 3.40.50.10050; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_00100_B; IF_2_B; 1.
DR InterPro; IPR044145; IF2_II.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR000178; TF_IF2_bacterial-like.
DR InterPro; IPR015760; TIF_IF2.
DR InterPro; IPR023115; TIF_IF2_dom3.
DR InterPro; IPR036925; TIF_IF2_dom3_sf.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR PANTHER; PTHR43381; PTHR43381; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF11987; IF-2; 1.
DR SUPFAM; SSF50447; SSF50447; 2.
DR SUPFAM; SSF52156; SSF52156; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00487; IF-2; 1.
DR TIGRFAMs; TIGR00231; small_GTP; 1.
DR PROSITE; PS51722; G_TR_2; 1.
DR PROSITE; PS01176; IF2; 1.
PE 3: Inferred from homology;
KW Cytoplasm; GTP-binding; Initiation factor; Nucleotide-binding;
KW Protein biosynthesis.
FT CHAIN 1..832
FT /note="Translation initiation factor IF-2"
FT /id="PRO_0000228161"
FT DOMAIN 331..500
FT /note="tr-type G"
FT REGION 1..87
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 120..148
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 163..201
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 340..347
FT /note="G1"
FT /evidence="ECO:0000250"
FT REGION 365..369
FT /note="G2"
FT /evidence="ECO:0000250"
FT REGION 386..389
FT /note="G3"
FT /evidence="ECO:0000250"
FT REGION 440..443
FT /note="G4"
FT /evidence="ECO:0000250"
FT REGION 476..478
FT /note="G5"
FT /evidence="ECO:0000250"
FT COMPBIAS 21..46
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 71..87
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 340..347
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 386..390
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 440..443
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
SQ SEQUENCE 832 AA; 88755 MW; 27D0E71FD56CF213 CRC64;
MLMSDVEKFG GDCGSSGGSG RPTLKLGTRA STLAKTPTST GGRTFMTVEV RSRKRKASGA
SPAEGVGYGT SPYTSDDNRQ GQISRSATCS LTAREQLSRI NAIHTADSIS AQKEAAKKLR
DEEEVEVAPP EGESVIDEPD SVKEPAAAAD AVADVATPVL GDIAPGAAGT RPGRGGHDDK
GKRYSYQGAG GKIKEKEGGG GVKKAAASRA SSKHIKLDIE NALSGTEERY VLMASSRRRG
GSKSDRRISR DVVIPDEIEV KALAAAMAEK VGDVLRVLSH MGVEARQNTA IGSDVASEVA
ERFSHRPKVV SKIQMERELS DISDSGLALE PRPPVVTVMG HVDHGKTSLL DVLRKSNVAE
KEFRGITQHI GAYQIDVDGK KITFLDTPGH EAFSDMRARG TNVTDIVVLV VAADDGVMPQ
TVESINHVKT AGVSMVVAVN KIDRSDANVD KITNDLLQHG VVPEKLGGDV MIVPVSAKTG
ENLDKLKSSI LLLAEMLELR APVEGRAQGV VIESKIERNC GVVATVIVQR GTLRKGNVVV
AGDGSYGKVR NMFDDSDNSV EEALPSMPVR VLGLDKVPKA GDVFLVMPSE KHARDLLEHR
AGINLSRGRD SGRNDSVFTG PLFSMDRPEG VNMILKADVA GSLEAISRSV AQIEHEEVKF
NILHKDIGDV TKSDILLAEA ASAVVLAFNV KVDAQARDLV RQKDVDIRHH RVIYDLIDDV
KGVVCGKLKP IIREVQVGLL VVREVFSSGK GGTVIGCYVS EGAVSRGALV KIYRNDAVTC
EGKVKVLRRF KDDVKEVGHG LECGVLVEGA KDVAVGDVIK VLEVVEHARV VE