IF2_BORBR
ID IF2_BORBR Reviewed; 997 AA.
AC Q7WHG2;
DT 15-DEC-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2003, sequence version 1.
DT 03-AUG-2022, entry version 109.
DE RecName: Full=Translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100};
GN Name=infB {ECO:0000255|HAMAP-Rule:MF_00100}; OrderedLocusNames=BB3246;
OS Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
OS (Alcaligenes bronchisepticus).
OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC Alcaligenaceae; Bordetella.
OX NCBI_TaxID=257310;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-588 / NCTC 13252 / RB50;
RX PubMed=12910271; DOI=10.1038/ng1227;
RA Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N.R.,
RA Harris D.E., Holden M.T.G., Churcher C.M., Bentley S.D., Mungall K.L.,
RA Cerdeno-Tarraga A.-M., Temple L., James K.D., Harris B., Quail M.A.,
RA Achtman M., Atkin R., Baker S., Basham D., Bason N., Cherevach I.,
RA Chillingworth T., Collins M., Cronin A., Davis P., Doggett J., Feltwell T.,
RA Goble A., Hamlin N., Hauser H., Holroyd S., Jagels K., Leather S.,
RA Moule S., Norberczak H., O'Neil S., Ormond D., Price C., Rabbinowitsch E.,
RA Rutter S., Sanders M., Saunders D., Seeger K., Sharp S., Simmonds M.,
RA Skelton J., Squares R., Squares S., Stevens K., Unwin L., Whitehead S.,
RA Barrell B.G., Maskell D.J.;
RT "Comparative analysis of the genome sequences of Bordetella pertussis,
RT Bordetella parapertussis and Bordetella bronchiseptica.";
RL Nat. Genet. 35:32-40(2003).
CC -!- FUNCTION: One of the essential components for the initiation of protein
CC synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis
CC and promotes its binding to the 30S ribosomal subunits. Also involved
CC in the hydrolysis of GTP during the formation of the 70S ribosomal
CC complex. {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SIMILARITY: Belongs to the TRAFAC class translation factor GTPase
CC superfamily. Classic translation factor GTPase family. IF-2 subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_00100}.
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DR EMBL; BX640446; CAE33738.1; -; Genomic_DNA.
DR RefSeq; WP_003810548.1; NC_002927.3.
DR AlphaFoldDB; Q7WHG2; -.
DR SMR; Q7WHG2; -.
DR STRING; 257310.BB3246; -.
DR PRIDE; Q7WHG2; -.
DR EnsemblBacteria; CAE33738; CAE33738; BB3246.
DR GeneID; 56479356; -.
DR KEGG; bbr:BB3246; -.
DR eggNOG; COG0532; Bacteria.
DR HOGENOM; CLU_006301_6_0_4; -.
DR OMA; NRDNRTG; -.
DR OrthoDB; 347113at2; -.
DR Proteomes; UP000001027; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-UniRule.
DR CDD; cd03702; IF2_mtIF2_II; 1.
DR Gene3D; 3.40.50.10050; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_00100_B; IF_2_B; 1.
DR InterPro; IPR009061; DNA-bd_dom_put_sf.
DR InterPro; IPR013575; IF2_assoc_dom_bac.
DR InterPro; IPR044145; IF2_II.
DR InterPro; IPR006847; IF2_N.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR000178; TF_IF2_bacterial-like.
DR InterPro; IPR015760; TIF_IF2.
DR InterPro; IPR023115; TIF_IF2_dom3.
DR InterPro; IPR036925; TIF_IF2_dom3_sf.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR PANTHER; PTHR43381; PTHR43381; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF11987; IF-2; 1.
DR Pfam; PF08364; IF2_assoc; 1.
DR Pfam; PF04760; IF2_N; 2.
DR SUPFAM; SSF46955; SSF46955; 1.
DR SUPFAM; SSF50447; SSF50447; 2.
DR SUPFAM; SSF52156; SSF52156; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00487; IF-2; 1.
DR TIGRFAMs; TIGR00231; small_GTP; 1.
DR PROSITE; PS51722; G_TR_2; 1.
DR PROSITE; PS01176; IF2; 1.
PE 3: Inferred from homology;
KW Cytoplasm; GTP-binding; Initiation factor; Nucleotide-binding;
KW Protein biosynthesis.
FT CHAIN 1..997
FT /note="Translation initiation factor IF-2"
FT /id="PRO_0000137173"
FT DOMAIN 498..665
FT /note="tr-type G"
FT REGION 101..409
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 507..514
FT /note="G1"
FT /evidence="ECO:0000250"
FT REGION 532..536
FT /note="G2"
FT /evidence="ECO:0000250"
FT REGION 553..556
FT /note="G3"
FT /evidence="ECO:0000250"
FT REGION 607..610
FT /note="G4"
FT /evidence="ECO:0000250"
FT REGION 643..645
FT /note="G5"
FT /evidence="ECO:0000250"
FT COMPBIAS 180..194
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 277..311
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 507..514
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 553..557
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 607..610
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
SQ SEQUENCE 997 AA; 106165 MW; AA8DA462AE4B47D5 CRC64;
MSSNTVAQFA TELKMPANVL LEQLRAAGVD LKSVDDAVTD SDKAKLLESL RRAHGATEGK
KITLTRRQTS EIRQADATGR SRTIQVEVRK KRVFVKRDPA ELAAEQAAAR AEEAAAEAVP
AEAAPAPAEP VRAEPAVETA AKPVEPPVAE APAEPVAAPA AEPQSEQPAQ AEAQPEPTPA
AQAEPEPQPE PQPEAAPAQA VAEPVEPAKN VSVTETEAEQ ARPEPVVHAQ TELTSKTPAP
VAQPSAPAES PKSAKAEPAA APKTTAKPGE IRRAAAPAAP DRAREEARRA AEAEAAALRE
MLSRPRKVLR APEPEPQAGA LSGTLHKPAG KPATTAAPKK DAKPGAPGAK KTIKTAEVSS
TWSDDSARKK PADNKPAVTT RDGWRAGGKG GRGGRNSRNQ HQDRRHEQVQ QEFIAREIHV
PETISVADLA HKMSVKAAEV IKQLMKLGQM VTINQVLDQE TAMIVVQEFG HMAIAAKLDD
PEAFLDETAA VTEAEAEPRA PVVTVMGHVD HGKTSLLDYI RRAKVASGEA GGITQHIGAY
HVETGRGVVT FLDTPGHEAF TAMRARGAKA TDIVILVVAA DDGVMPQTRE AIHHAKAGGV
PLVVAVNKID KPEANPERVK QELVAEEVVP EEYGGDVPFV PVSAKTGAGI DDLLENVLLQ
AEILELKAPI EAPAKGLVIE ARLDKGRGPV ATILVQSGTL KRGDVVLAGA SFGRVRAMLD
ENGKQIQTAG PSIPVEIQGL TEVPAAGDEL MVLSDERKAR EIALFRQGKF RDVKLARQQA
AKLESMFDNL GEGTQTLALI VKTDVQGSQE ALVSSLTKLS TDEVRVQVVH AAVGGISESD
VNLAIASNAV VIGFNVRAEQ SAKKLAETNG IDLRYYNIIY DAVDEVKAAM SGMLAPEKRE
EVIGLVEVRE VYTISRIGTV AGCMVLDGVV RRDSQVRLLR NNVVQWTGHL DSLRRFKDDV
KEVKSGFDCG LTLRGNNDLQ LGDQLEVFEI KEIARTL