IF2_CLOBA
ID IF2_CLOBA Reviewed; 687 AA.
AC B2V4G9;
DT 24-MAR-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-JUL-2008, sequence version 1.
DT 03-AUG-2022, entry version 78.
DE RecName: Full=Translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100};
GN Name=infB {ECO:0000255|HAMAP-Rule:MF_00100}; OrderedLocusNames=CLH_1224;
OS Clostridium botulinum (strain Alaska E43 / Type E3).
OC Bacteria; Firmicutes; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=508767;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Alaska E43 / Type E3;
RA Brinkac L.M., Brown J.L., Bruce D., Detter C., Munk C., Smith L.A.,
RA Smith T.J., Sutton G., Brettin T.S.;
RT "Complete genome sequence of Clostridium botulinum E3 str. Alaska E43.";
RL Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: One of the essential components for the initiation of protein
CC synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis
CC and promotes its binding to the 30S ribosomal subunits. Also involved
CC in the hydrolysis of GTP during the formation of the 70S ribosomal
CC complex. {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SIMILARITY: Belongs to the TRAFAC class translation factor GTPase
CC superfamily. Classic translation factor GTPase family. IF-2 subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_00100}.
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DR EMBL; CP001078; ACD52052.1; -; Genomic_DNA.
DR RefSeq; WP_003370394.1; NC_010723.1.
DR AlphaFoldDB; B2V4G9; -.
DR SMR; B2V4G9; -.
DR KEGG; cbt:CLH_1224; -.
DR HOGENOM; CLU_006301_5_1_9; -.
DR OMA; NRDNRTG; -.
DR OrthoDB; 347113at2; -.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-UniRule.
DR CDD; cd03702; IF2_mtIF2_II; 1.
DR Gene3D; 3.40.50.10050; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_00100_B; IF_2_B; 1.
DR InterPro; IPR044145; IF2_II.
DR InterPro; IPR006847; IF2_N.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR000178; TF_IF2_bacterial-like.
DR InterPro; IPR015760; TIF_IF2.
DR InterPro; IPR023115; TIF_IF2_dom3.
DR InterPro; IPR036925; TIF_IF2_dom3_sf.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR PANTHER; PTHR43381; PTHR43381; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF11987; IF-2; 1.
DR Pfam; PF04760; IF2_N; 2.
DR SUPFAM; SSF50447; SSF50447; 2.
DR SUPFAM; SSF52156; SSF52156; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00487; IF-2; 1.
DR TIGRFAMs; TIGR00231; small_GTP; 1.
DR PROSITE; PS51722; G_TR_2; 1.
DR PROSITE; PS01176; IF2; 1.
PE 3: Inferred from homology;
KW Cytoplasm; GTP-binding; Initiation factor; Nucleotide-binding;
KW Protein biosynthesis.
FT CHAIN 1..687
FT /note="Translation initiation factor IF-2"
FT /id="PRO_1000093773"
FT DOMAIN 186..355
FT /note="tr-type G"
FT REGION 195..202
FT /note="G1"
FT /evidence="ECO:0000250"
FT REGION 220..224
FT /note="G2"
FT /evidence="ECO:0000250"
FT REGION 241..244
FT /note="G3"
FT /evidence="ECO:0000250"
FT REGION 295..298
FT /note="G4"
FT /evidence="ECO:0000250"
FT REGION 331..333
FT /note="G5"
FT /evidence="ECO:0000250"
FT BINDING 195..202
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 241..245
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 295..298
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
SQ SEQUENCE 687 AA; 75774 MW; 421725109A68906D CRC64;
MSKIRVYELA KELNVSSKDL ITLLMDEFGV EVKNHMSAIE DEEAQLIKEL LATKPEYVEG
SLEDSKSLVD EYEEILQNEL NKAKKKRKKN KREDKDDENE ELETEVIEIG ETITVKELAE
KLNKPSNDVI RTLIFSGVMA AINQEIDFAT AEKVCESYGV ILEKLEVIEE LEAVEVEEDD
EENLEKRPPI VTVMGHVDHG KTSLLDAIRK AKVTDTEAGG ITQHIGAYTI NINGEEITFL
DTPGHEAFTA MRARGAQVTD VVILVVAADD GIMPQTKEAI NHCKAAGVPM VVAINKIDKP
GANPDRVKQE LTEHGLVVEE WGGDTICEEV SAKSNLNIEK LLEMVLLTAE MLELKANKER
KAKGTVIEAK LDKGRGPVAT LLVQNGTLHV GDAIIVGSTY GRIRAMFDDT GKKIKSAGPS
IPVEVLGLSE VPEAGDRFNQ VKDEKTARIM ADKRKDKEKS DSLMSGNRVS LEDLYSQIKE
GKVKELGIIV KADVQGSVQA INQSLEKLST DDVKVRVIHG GVGAITETDI TLATASNAIV
IGFNVRPDNN AVAQADKENV EIKTYRIIYD AIEDVKSAMI GMLEPEYKEV ILGSAEVRET
YKISNVGTIA GCYVLNGKLQ RNAETRVIRD GIVIFESSLS SLKRFKDDVK EVNTGYECGL
TVEKFNDVKE GDILECFMME AIKRKEL