IF2_CLOPS
ID IF2_CLOPS Reviewed; 679 AA.
AC Q0SSD4;
DT 15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT 05-SEP-2006, sequence version 1.
DT 03-AUG-2022, entry version 95.
DE RecName: Full=Translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100};
GN Name=infB {ECO:0000255|HAMAP-Rule:MF_00100}; OrderedLocusNames=CPR_1658;
OS Clostridium perfringens (strain SM101 / Type A).
OC Bacteria; Firmicutes; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=289380;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SM101 / Type A;
RX PubMed=16825665; DOI=10.1101/gr.5238106;
RA Myers G.S.A., Rasko D.A., Cheung J.K., Ravel J., Seshadri R., DeBoy R.T.,
RA Ren Q., Varga J., Awad M.M., Brinkac L.M., Daugherty S.C., Haft D.H.,
RA Dodson R.J., Madupu R., Nelson W.C., Rosovitz M.J., Sullivan S.A.,
RA Khouri H., Dimitrov G.I., Watkins K.L., Mulligan S., Benton J., Radune D.,
RA Fisher D.J., Atkins H.S., Hiscox T., Jost B.H., Billington S.J.,
RA Songer J.G., McClane B.A., Titball R.W., Rood J.I., Melville S.B.,
RA Paulsen I.T.;
RT "Skewed genomic variability in strains of the toxigenic bacterial pathogen,
RT Clostridium perfringens.";
RL Genome Res. 16:1031-1040(2006).
CC -!- FUNCTION: One of the essential components for the initiation of protein
CC synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis
CC and promotes its binding to the 30S ribosomal subunits. Also involved
CC in the hydrolysis of GTP during the formation of the 70S ribosomal
CC complex. {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SIMILARITY: Belongs to the TRAFAC class translation factor GTPase
CC superfamily. Classic translation factor GTPase family. IF-2 subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_00100}.
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DR EMBL; CP000312; ABG87394.1; -; Genomic_DNA.
DR AlphaFoldDB; Q0SSD4; -.
DR SMR; Q0SSD4; -.
DR EnsemblBacteria; ABG87394; ABG87394; CPR_1658.
DR KEGG; cpr:CPR_1658; -.
DR OMA; NRDNRTG; -.
DR Proteomes; UP000001824; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-UniRule.
DR CDD; cd03702; IF2_mtIF2_II; 1.
DR Gene3D; 3.40.50.10050; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_00100_B; IF_2_B; 1.
DR InterPro; IPR044145; IF2_II.
DR InterPro; IPR006847; IF2_N.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR000178; TF_IF2_bacterial-like.
DR InterPro; IPR015760; TIF_IF2.
DR InterPro; IPR023115; TIF_IF2_dom3.
DR InterPro; IPR036925; TIF_IF2_dom3_sf.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR PANTHER; PTHR43381; PTHR43381; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF11987; IF-2; 1.
DR Pfam; PF04760; IF2_N; 2.
DR SUPFAM; SSF50447; SSF50447; 2.
DR SUPFAM; SSF52156; SSF52156; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00487; IF-2; 1.
DR TIGRFAMs; TIGR00231; small_GTP; 1.
DR PROSITE; PS51722; G_TR_2; 1.
DR PROSITE; PS01176; IF2; 1.
PE 3: Inferred from homology;
KW Cytoplasm; GTP-binding; Initiation factor; Nucleotide-binding;
KW Protein biosynthesis.
FT CHAIN 1..679
FT /note="Translation initiation factor IF-2"
FT /id="PRO_1000008234"
FT DOMAIN 178..347
FT /note="tr-type G"
FT REGION 187..194
FT /note="G1"
FT /evidence="ECO:0000250"
FT REGION 212..216
FT /note="G2"
FT /evidence="ECO:0000250"
FT REGION 233..236
FT /note="G3"
FT /evidence="ECO:0000250"
FT REGION 287..290
FT /note="G4"
FT /evidence="ECO:0000250"
FT REGION 323..325
FT /note="G5"
FT /evidence="ECO:0000250"
FT BINDING 187..194
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 233..237
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 287..290
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
SQ SEQUENCE 679 AA; 74134 MW; D3BDC18D6D4C4C87 CRC64;
MSKIRVYELA KELRVPSKVL INVLMDEFGV EVKNHMSVIE DEDAALIKEL LAGSEANSEL
VAEYEAELAE EVNNAAKKKK KRKKGSEDDS LEQDVEVIEI GKTITVKELA EKLNKPVNDV
IKTLIFTGVM AAINQEIDFE TAEKVAEKYE VAVYEKEEEN TLEEFEEETD VEEENLAKRP
PIITVMGHVD HGKTSLLDAI RKSKVTSTEA GGITQHIGAY TVEVNGETLT FLDTPGHEAF
TAMRARGAQI TDVVILVVAA DDGIMPQTVE AINHCKAANV PMIVAINKMD REGANPDRVK
QELTEHGLVV EDWGGDIIAV PVSAKTRENI DTLLEMVLLT SEMQELKADA GRKAKGTVVE
AKLDKGRGAV ATLLVQNGTL HMGDSIIVGS TYGRIRAMFD DSGKKIKSAG PSIPVEVLGL
SEVPAAGDRF TVVKDEKTAR NMAEARKEKI RQESFATSHR VSLEDLYSQI KEGSVKELSV
IVKADVQGSV EAIKASLEKL STDDVKVRVI HGAVGAISET DITLAAASNA IVIGFNVRPD
NNAVAASERD GVEVKTYRVI YDAIEDIKSA MIGMLDPEYK EVVLGTAEIR ATYKISNVGT
IAGGYVLTGK LVRNADVRVI REGIVIFESK LASLKRFKDD VKEVNAGYEC GFSVEKFNDI
KEGDIIEAYT MEAVQRKEL