IF2_FRACC
ID IF2_FRACC Reviewed; 1062 AA.
AC Q2J728;
DT 20-MAY-2008, integrated into UniProtKB/Swiss-Prot.
DT 07-MAR-2006, sequence version 1.
DT 03-AUG-2022, entry version 106.
DE RecName: Full=Translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100};
GN Name=infB {ECO:0000255|HAMAP-Rule:MF_00100};
GN OrderedLocusNames=Francci3_3562;
OS Frankia casuarinae (strain DSM 45818 / CECT 9043 / CcI3).
OC Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.
OX NCBI_TaxID=106370;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 45818 / CECT 9043 / CcI3;
RX PubMed=17151343; DOI=10.1101/gr.5798407;
RA Normand P., Lapierre P., Tisa L.S., Gogarten J.P., Alloisio N.,
RA Bagnarol E., Bassi C.A., Berry A.M., Bickhart D.M., Choisne N., Couloux A.,
RA Cournoyer B., Cruveiller S., Daubin V., Demange N., Francino M.P.,
RA Goltsman E., Huang Y., Kopp O.R., Labarre L., Lapidus A., Lavire C.,
RA Marechal J., Martinez M., Mastronunzio J.E., Mullin B.C., Niemann J.,
RA Pujic P., Rawnsley T., Rouy Z., Schenowitz C., Sellstedt A., Tavares F.,
RA Tomkins J.P., Vallenet D., Valverde C., Wall L.G., Wang Y., Medigue C.,
RA Benson D.R.;
RT "Genome characteristics of facultatively symbiotic Frankia sp. strains
RT reflect host range and host plant biogeography.";
RL Genome Res. 17:7-15(2007).
CC -!- FUNCTION: One of the essential components for the initiation of protein
CC synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis
CC and promotes its binding to the 30S ribosomal subunits. Also involved
CC in the hydrolysis of GTP during the formation of the 70S ribosomal
CC complex. {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SIMILARITY: Belongs to the TRAFAC class translation factor GTPase
CC superfamily. Classic translation factor GTPase family. IF-2 subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_00100}.
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DR EMBL; CP000249; ABD12914.1; -; Genomic_DNA.
DR RefSeq; WP_011437938.1; NZ_JENI01000005.1.
DR AlphaFoldDB; Q2J728; -.
DR SMR; Q2J728; -.
DR STRING; 106370.Francci3_3562; -.
DR EnsemblBacteria; ABD12914; ABD12914; Francci3_3562.
DR KEGG; fra:Francci3_3562; -.
DR eggNOG; COG0532; Bacteria.
DR HOGENOM; CLU_006301_9_4_11; -.
DR OMA; QVRPEMI; -.
DR OrthoDB; 347113at2; -.
DR PhylomeDB; Q2J728; -.
DR Proteomes; UP000001937; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-UniRule.
DR CDD; cd03702; IF2_mtIF2_II; 1.
DR Gene3D; 3.40.50.10050; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_00100_B; IF_2_B; 1.
DR InterPro; IPR044145; IF2_II.
DR InterPro; IPR006847; IF2_N.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR000178; TF_IF2_bacterial-like.
DR InterPro; IPR015760; TIF_IF2.
DR InterPro; IPR023115; TIF_IF2_dom3.
DR InterPro; IPR036925; TIF_IF2_dom3_sf.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR PANTHER; PTHR43381; PTHR43381; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF11987; IF-2; 1.
DR Pfam; PF04760; IF2_N; 1.
DR PRINTS; PR00315; ELONGATNFCT.
DR SUPFAM; SSF50447; SSF50447; 2.
DR SUPFAM; SSF52156; SSF52156; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00487; IF-2; 1.
DR TIGRFAMs; TIGR00231; small_GTP; 1.
DR PROSITE; PS51722; G_TR_2; 1.
DR PROSITE; PS01176; IF2; 1.
PE 3: Inferred from homology;
KW Cytoplasm; GTP-binding; Initiation factor; Nucleotide-binding;
KW Protein biosynthesis; Reference proteome.
FT CHAIN 1..1062
FT /note="Translation initiation factor IF-2"
FT /id="PRO_0000335472"
FT DOMAIN 555..727
FT /note="tr-type G"
FT REGION 34..463
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 564..571
FT /note="G1"
FT /evidence="ECO:0000250"
FT REGION 589..593
FT /note="G2"
FT /evidence="ECO:0000250"
FT REGION 614..617
FT /note="G3"
FT /evidence="ECO:0000250"
FT REGION 668..671
FT /note="G4"
FT /evidence="ECO:0000250"
FT REGION 704..706
FT /note="G5"
FT /evidence="ECO:0000250"
FT COMPBIAS 71..124
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 125..139
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 149..200
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 214..228
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 254..282
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 564..571
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 614..618
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 668..671
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
SQ SEQUENCE 1062 AA; 107742 MW; BAD86B2CB6058D77 CRC64;
MAGKARVHEL AKELGVDSKT VLAKLKDLGE FVKSASSTVE APVVRKLKEA FPADGAPTSP
GRATSRPGPP GGGARPTPPS RPGLAPRPGP RPVPGRPGPL GRPGPATPAP SPSPASPPLP
ASPVQASPVQ ASPVQASPTS APAAPRPAAA SAVPAPPMPS VPSAPSGPRP GPNAPRPGAP
QGGGRPRPGT PVPPSGPTAG GPTAGGPTAG GPTAGGPRPG PRPGPRSAAP GNNPYTTPSA
GPRPSAGPRP SAGQSGPPST PTPRPSAPRS GTPRPGTPRP GGPRPGGTGA GGPRPTPGGM
PPRPGGPRSG AGGGMPPRPG GTGGPRPNAN MFQPRPAGGP PGRPGGGGAP GRPGGGGAPG
RPGGGGGPRP GGFAGRGGAP GRPGGGGGGG GAPGRPGGGG GGGGAPGRPA AGGRGRGGTT
AGAFGPGGRG RPGRQRKSKR AKRQEWESGL EAPRMGAMVP RGNGQAIRLP RGASLADFAD
KIDANPGALV QVVFTQLGEM VTATQSCTDE TLQLLGVTLG YEVQIVSPED EDKELLESFD
LSFGGEYGDD VELSSRPPVV TVMGHVDHGK TKLLDAIRST DVVGGEAGGI TQHIGAYQVR
AKVDGDERPI TFIDTPGHET FTAMRARGAQ VTDIVVLVVA ADDGVKPQTI EALNHAQAAG
VPVVVAVNKV DKEGADPAKV RGQLTEYGLV AEEYGGDTMF VDVSARNRTN IDGLLEAIVL
TADASLDLRA PTEVEAQGVA IEGRLDRGRG PVATVLVQRG TLRVGDSVVA GEAFGRVRAM
LDEHGGQVVE AGPARPVQVL GFTSVPDAGD NFLVVPEDRV ARQIAERRQA RERNAELALS
RGRPTLETIL ERMKEGEKTQ LNLILKGDVS GSVEALEDAL LKIDVGDEVG LRIIDRGVGA
ITETNVMLAS ASDAIIIGFN VRPQGKATEL ADREGVEVRY YSVIYQAIED IENALKGMLK
PVYEEAQLGT AEVREVFRVP RIGNVAGSLV RSGVIRRNTK ARLIRDGVVV ADNLTVESLK
RFKDDATEVR EGYECGIGLG SFNDIKIDDV IETFEQREVP RA