IF2_HERAR
ID IF2_HERAR Reviewed; 941 AA.
AC A4G7S7;
DT 15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT 17-APR-2007, sequence version 1.
DT 03-AUG-2022, entry version 91.
DE RecName: Full=Translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100};
GN Name=infB {ECO:0000255|HAMAP-Rule:MF_00100}; OrderedLocusNames=HEAR2433;
OS Herminiimonas arsenicoxydans.
OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC Oxalobacteraceae; Herminiimonas.
OX NCBI_TaxID=204773;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ULPAs1;
RX PubMed=17432936; DOI=10.1371/journal.pgen.0030053;
RA Muller D., Medigue C., Koechler S., Barbe V., Barakat M., Talla E.,
RA Bonnefoy V., Krin E., Arsene-Ploetze F., Carapito C., Chandler M.,
RA Cournoyer B., Cruveiller S., Dossat C., Duval S., Heymann M., Leize E.,
RA Lieutaud A., Lievremont D., Makita Y., Mangenot S., Nitschke W., Ortet P.,
RA Perdrial N., Schoepp B., Siguier P., Simeonova D.D., Rouy Z., Segurens B.,
RA Turlin E., Vallenet D., van Dorsselaer A., Weiss S., Weissenbach J.,
RA Lett M.-C., Danchin A., Bertin P.N.;
RT "A tale of two oxidation states: bacterial colonization of arsenic-rich
RT environments.";
RL PLoS Genet. 3:518-530(2007).
CC -!- FUNCTION: One of the essential components for the initiation of protein
CC synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis
CC and promotes its binding to the 30S ribosomal subunits. Also involved
CC in the hydrolysis of GTP during the formation of the 70S ribosomal
CC complex. {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SIMILARITY: Belongs to the TRAFAC class translation factor GTPase
CC superfamily. Classic translation factor GTPase family. IF-2 subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_00100}.
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DR EMBL; CU207211; CAL62564.1; -; Genomic_DNA.
DR RefSeq; WP_011871826.1; NC_009138.1.
DR AlphaFoldDB; A4G7S7; -.
DR SMR; A4G7S7; -.
DR STRING; 204773.HEAR2433; -.
DR PRIDE; A4G7S7; -.
DR EnsemblBacteria; CAL62564; CAL62564; HEAR2433.
DR KEGG; har:HEAR2433; -.
DR eggNOG; COG0532; Bacteria.
DR HOGENOM; CLU_006301_6_0_4; -.
DR OMA; NRDNRTG; -.
DR OrthoDB; 347113at2; -.
DR Proteomes; UP000006697; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-UniRule.
DR CDD; cd03702; IF2_mtIF2_II; 1.
DR Gene3D; 3.40.50.10050; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_00100_B; IF_2_B; 1.
DR InterPro; IPR009061; DNA-bd_dom_put_sf.
DR InterPro; IPR013575; IF2_assoc_dom_bac.
DR InterPro; IPR044145; IF2_II.
DR InterPro; IPR006847; IF2_N.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR000178; TF_IF2_bacterial-like.
DR InterPro; IPR015760; TIF_IF2.
DR InterPro; IPR023115; TIF_IF2_dom3.
DR InterPro; IPR036925; TIF_IF2_dom3_sf.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR PANTHER; PTHR43381; PTHR43381; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF11987; IF-2; 1.
DR Pfam; PF08364; IF2_assoc; 1.
DR Pfam; PF04760; IF2_N; 2.
DR SUPFAM; SSF46955; SSF46955; 1.
DR SUPFAM; SSF50447; SSF50447; 2.
DR SUPFAM; SSF52156; SSF52156; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00487; IF-2; 1.
DR TIGRFAMs; TIGR00231; small_GTP; 1.
DR PROSITE; PS51722; G_TR_2; 1.
DR PROSITE; PS01176; IF2; 1.
PE 3: Inferred from homology;
KW Cytoplasm; GTP-binding; Initiation factor; Nucleotide-binding;
KW Protein biosynthesis; Reference proteome.
FT CHAIN 1..941
FT /note="Translation initiation factor IF-2"
FT /id="PRO_1000008254"
FT DOMAIN 441..610
FT /note="tr-type G"
FT REGION 170..228
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 252..351
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 450..457
FT /note="G1"
FT /evidence="ECO:0000250"
FT REGION 475..479
FT /note="G2"
FT /evidence="ECO:0000250"
FT REGION 496..499
FT /note="G3"
FT /evidence="ECO:0000250"
FT REGION 550..553
FT /note="G4"
FT /evidence="ECO:0000250"
FT REGION 586..588
FT /note="G5"
FT /evidence="ECO:0000250"
FT COMPBIAS 271..294
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 297..311
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 332..350
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 450..457
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 496..500
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 550..553
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
SQ SEQUENCE 941 AA; 101593 MW; 11B0F23DFA099E7D CRC64;
MASNNVAQFA TELKMPADVL LTQLRDAGVE KSSTSDELSK ADKDKLLEHL RRAHGVAPDG
EKKKITLMRK ETTEIKQADA TGKSRTIQVE VRKKRTFVKR DEPAAEEAPV VVAAPIIDAA
EVERRAEESR RHAELMARQE ADLREKQERL AKLEAEKETQ AKALKKAEVD AQKAEVDAQK
AEAEKPVEVK ADESAIEEKK RVAAEESKKK AAAAAKEAAK EANEKAAATE LARKVVADEV
AQIKAMMNAP RRAIKAPEPV APVAKPAAEG TLHKPADKKP GEKKDEKKPA VTADKKSIKS
ANVSSTWQDD AKKRSAGIKT RGNTGGGRDG WRAGTKGRRQ SHHDDRESNF QAPTEAVVKD
VQVPETITVA ELAHKMSVKA SEVIKQLMKL GQMCTINQVL DQETAMILVE EMGHVAHAAK
LDDPEALLEI GAEQADVEAL PRAPVVTVMG HVDHGKTSLL DYIRRAKVAT GEAGGITQHI
GAYHVETPRG MITFLDTPGH EAFTAMRARG AKATDIVILV VAADDGVMPQ TKEAIAHAKA
AGVPLVVAIN KIDKPSANLD RVKQELIAEQ VVPEEYGGDS PFVPVSAKTG EGIDALLEQV
LLQAEVLELK APVVSPARGL VVEAKLDKGR GPVATILVQS GTLRRGDVVL AGSAYGRVRA
MLDENGKSIS EAGPSIPVEI QGLTEVPNAG EEVMVMADER KAREIGLFRQ GKFRDVKLAK
QQAAKLENMF ENMGEGEVKN LPMIIKTDVQ GSQEALVGSL QKLSTGEVRV QVVHAAVGGI
SESDVNLAVA SKAVIIGFNT RADASARKLA EANGVDIRYY NIIYDAVDEI KAAMSGMLSP
EKREQALGLV EIRQVILVSK VGAIAGCYVL EGVVKRGASV RLLRDNVVIW TGELDSLKRF
KDDAKEVKFG FECGLTLKNF NDIKEGDQLE VFEVQEIART L