IF2_KORVE
ID IF2_KORVE Reviewed; 1011 AA.
AC Q1IIT3;
DT 20-MAY-2008, integrated into UniProtKB/Swiss-Prot.
DT 13-JUN-2006, sequence version 1.
DT 03-AUG-2022, entry version 100.
DE RecName: Full=Translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100};
GN Name=infB {ECO:0000255|HAMAP-Rule:MF_00100};
GN OrderedLocusNames=Acid345_4217;
OS Koribacter versatilis (strain Ellin345).
OC Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae;
OC Candidatus Koribacter.
OX NCBI_TaxID=204669;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Ellin345;
RX PubMed=19201974; DOI=10.1128/aem.02294-08;
RA Ward N.L., Challacombe J.F., Janssen P.H., Henrissat B., Coutinho P.M.,
RA Wu M., Xie G., Haft D.H., Sait M., Badger J., Barabote R.D., Bradley B.,
RA Brettin T.S., Brinkac L.M., Bruce D., Creasy T., Daugherty S.C.,
RA Davidsen T.M., DeBoy R.T., Detter J.C., Dodson R.J., Durkin A.S.,
RA Ganapathy A., Gwinn-Giglio M., Han C.S., Khouri H., Kiss H., Kothari S.P.,
RA Madupu R., Nelson K.E., Nelson W.C., Paulsen I., Penn K., Ren Q.,
RA Rosovitz M.J., Selengut J.D., Shrivastava S., Sullivan S.A., Tapia R.,
RA Thompson L.S., Watkins K.L., Yang Q., Yu C., Zafar N., Zhou L., Kuske C.R.;
RT "Three genomes from the phylum Acidobacteria provide insight into the
RT lifestyles of these microorganisms in soils.";
RL Appl. Environ. Microbiol. 75:2046-2056(2009).
CC -!- FUNCTION: One of the essential components for the initiation of protein
CC synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis
CC and promotes its binding to the 30S ribosomal subunits. Also involved
CC in the hydrolysis of GTP during the formation of the 70S ribosomal
CC complex. {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SIMILARITY: Belongs to the TRAFAC class translation factor GTPase
CC superfamily. Classic translation factor GTPase family. IF-2 subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_00100}.
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DR EMBL; CP000360; ABF43217.1; -; Genomic_DNA.
DR RefSeq; WP_011525016.1; NC_008009.1.
DR AlphaFoldDB; Q1IIT3; -.
DR SMR; Q1IIT3; -.
DR STRING; 204669.Acid345_4217; -.
DR PRIDE; Q1IIT3; -.
DR EnsemblBacteria; ABF43217; ABF43217; Acid345_4217.
DR KEGG; aba:Acid345_4217; -.
DR eggNOG; COG0532; Bacteria.
DR HOGENOM; CLU_006301_5_1_0; -.
DR OMA; QVRPEMI; -.
DR OrthoDB; 347113at2; -.
DR Proteomes; UP000002432; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-UniRule.
DR CDD; cd03702; IF2_mtIF2_II; 1.
DR Gene3D; 3.40.50.10050; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_00100_B; IF_2_B; 1.
DR InterPro; IPR004161; EFTu-like_2.
DR InterPro; IPR044145; IF2_II.
DR InterPro; IPR006847; IF2_N.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR000178; TF_IF2_bacterial-like.
DR InterPro; IPR015760; TIF_IF2.
DR InterPro; IPR023115; TIF_IF2_dom3.
DR InterPro; IPR036925; TIF_IF2_dom3_sf.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR PANTHER; PTHR43381; PTHR43381; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF03144; GTP_EFTU_D2; 1.
DR Pfam; PF11987; IF-2; 1.
DR Pfam; PF04760; IF2_N; 2.
DR PRINTS; PR00315; ELONGATNFCT.
DR SUPFAM; SSF50447; SSF50447; 2.
DR SUPFAM; SSF52156; SSF52156; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00487; IF-2; 1.
DR TIGRFAMs; TIGR00231; small_GTP; 1.
DR PROSITE; PS51722; G_TR_2; 1.
DR PROSITE; PS01176; IF2; 1.
PE 3: Inferred from homology;
KW Cytoplasm; GTP-binding; Initiation factor; Nucleotide-binding;
KW Protein biosynthesis; Reference proteome.
FT CHAIN 1..1011
FT /note="Translation initiation factor IF-2"
FT /id="PRO_0000335452"
FT DOMAIN 502..678
FT /note="tr-type G"
FT REGION 49..152
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 187..407
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 511..518
FT /note="G1"
FT /evidence="ECO:0000250"
FT REGION 536..540
FT /note="G2"
FT /evidence="ECO:0000250"
FT REGION 564..567
FT /note="G3"
FT /evidence="ECO:0000250"
FT REGION 618..621
FT /note="G4"
FT /evidence="ECO:0000250"
FT REGION 654..656
FT /note="G5"
FT /evidence="ECO:0000250"
FT COMPBIAS 49..79
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 91..129
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 237..253
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 272..292
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 511..518
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 564..568
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 618..621
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
SQ SEQUENCE 1011 AA; 106830 MW; ED87202E2A0C479C CRC64;
MKIRINDLAR ELEVKSKAIL DALTKVGVTE KKTHSSSIED HEAVLVKKYI HEHGTEESPR
RRSAGEDEFK PKIDLSKISK PGDVLKALTQ KAAPPPPPPP PPRPAVKAPS PVSQEPRPPA
VPPAPQKPAV FARPASETVH TPPEPPKPRF ITPASVAAQR PVITPPKPPV PPAPPVAVAP
PAVIEPAAPA EEPKAAAPAT TAPEAPEVKA PVSPERVAPA ADTGAHVTAK PEAPAAPGAA
TPAPTPGRPL PGVPLRQQTP GRRMIVPQTG PRPVYSAPPP APPRPTPPPQ MSQGAGTRPG
MPVRGQPIFQ RRPQSGPGGG SGGPGGFQRP GGPPRPGDRP RGPHPTRQFP SGPRPMGGIG
LAPPGAPANK PAGRPAPARR PGQRYVPRGQ KEGPMKGFVP PPRLSLSNEP LPITRNITIS
EGISVKDLAE KLGIRAKDLI ARLLARGVFA TVNQTLEASL ASEMANHFGA STDVITFEDQ
LAQETAKAAG ETPEEAAANA VVRPPVVTIM GHVDHGKTSL LDAIRATDVA GGEAGGITQH
IGAYKVAIGD PNSPAFGREI VFLDTPGHEA FTRMRARGSK ITDIVVIVVA ADDGVMPQTV
EAIDHARAAN VPIIVAVNKI DKPDAMPERV KKQLADRGLM PEDWGGNTVF VDVSAKQKTN
LNLLMEMICL VADLGDLKAN PDRMASGTVV EAKLDRGRGP VATVLVQNGT LRTSDNFVVG
NAFGKVRAMF NDRGVSLDTA GPSTPVEIIG LETLPQAGDQ FTVVADREKA RDISEYREGR
AREAQLAKSS RVSLEGLAEQ LKTAGQKDLP IILKGDVQGS VEVLNDLLSK MSTEKVKITM
IRSGVGAITE SDVLLASASN AIIIGFNVRP ERKAQELAVQ EGVDIRLHSI IYELQDEMKK
AMLGLLEPII KETYQGRADV KDTFRIPKVG TIAGCQVADG IIKRDSHVRL VRDNVVIYTG
KIGSLKRFKD DASEVRNGME CGIGIAGYGD IRSGDVIEAF TSEKIAADSL H