IF2_MACCJ
ID IF2_MACCJ Reviewed; 726 AA.
AC B9EBE9;
DT 28-JUL-2009, integrated into UniProtKB/Swiss-Prot.
DT 24-MAR-2009, sequence version 1.
DT 03-AUG-2022, entry version 78.
DE RecName: Full=Translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100};
GN Name=infB {ECO:0000255|HAMAP-Rule:MF_00100}; OrderedLocusNames=MCCL_0853;
OS Macrococcus caseolyticus (strain JCSC5402).
OC Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Macrococcus.
OX NCBI_TaxID=458233;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JCSC5402;
RX PubMed=19074389; DOI=10.1128/jb.01058-08;
RA Baba T., Kuwahara-Arai K., Uchiyama I., Takeuchi F., Ito T., Hiramatsu K.;
RT "Complete genome sequence of Macrococcus caseolyticus strain JCSCS5402,
RT reflecting the ancestral genome of the human-pathogenic staphylococci.";
RL J. Bacteriol. 191:1180-1190(2009).
CC -!- FUNCTION: One of the essential components for the initiation of protein
CC synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis
CC and promotes its binding to the 30S ribosomal subunits. Also involved
CC in the hydrolysis of GTP during the formation of the 70S ribosomal
CC complex. {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SIMILARITY: Belongs to the TRAFAC class translation factor GTPase
CC superfamily. Classic translation factor GTPase family. IF-2 subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_00100}.
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DR EMBL; AP009484; BAH17560.1; -; Genomic_DNA.
DR RefSeq; WP_012656760.1; NC_011999.1.
DR AlphaFoldDB; B9EBE9; -.
DR SMR; B9EBE9; -.
DR STRING; 458233.MCCL_0853; -.
DR PRIDE; B9EBE9; -.
DR EnsemblBacteria; BAH17560; BAH17560; MCCL_0853.
DR KEGG; mcl:MCCL_0853; -.
DR eggNOG; COG0532; Bacteria.
DR HOGENOM; CLU_006301_5_1_9; -.
DR OMA; NRDNRTG; -.
DR OrthoDB; 347113at2; -.
DR Proteomes; UP000001383; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-UniRule.
DR CDD; cd03702; IF2_mtIF2_II; 1.
DR Gene3D; 3.40.50.10050; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_00100_B; IF_2_B; 1.
DR InterPro; IPR044145; IF2_II.
DR InterPro; IPR006847; IF2_N.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR000178; TF_IF2_bacterial-like.
DR InterPro; IPR015760; TIF_IF2.
DR InterPro; IPR023115; TIF_IF2_dom3.
DR InterPro; IPR036925; TIF_IF2_dom3_sf.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR PANTHER; PTHR43381; PTHR43381; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF11987; IF-2; 1.
DR Pfam; PF04760; IF2_N; 2.
DR SUPFAM; SSF50447; SSF50447; 2.
DR SUPFAM; SSF52156; SSF52156; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00487; IF-2; 1.
DR TIGRFAMs; TIGR00231; small_GTP; 1.
DR PROSITE; PS51722; G_TR_2; 1.
DR PROSITE; PS01176; IF2; 1.
PE 3: Inferred from homology;
KW Cytoplasm; GTP-binding; Initiation factor; Nucleotide-binding;
KW Protein biosynthesis; Reference proteome.
FT CHAIN 1..726
FT /note="Translation initiation factor IF-2"
FT /id="PRO_1000118766"
FT DOMAIN 227..396
FT /note="tr-type G"
FT REGION 50..141
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 236..243
FT /note="G1"
FT /evidence="ECO:0000250"
FT REGION 261..265
FT /note="G2"
FT /evidence="ECO:0000250"
FT REGION 282..285
FT /note="G3"
FT /evidence="ECO:0000250"
FT REGION 336..339
FT /note="G4"
FT /evidence="ECO:0000250"
FT REGION 372..374
FT /note="G5"
FT /evidence="ECO:0000250"
FT COMPBIAS 50..91
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 236..243
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 282..286
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 336..339
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
SQ SEQUENCE 726 AA; 79857 MW; D57C471D4AE62D6A CRC64;
MSKKRIYEYA KEVSLKSKDI IDALKKMNIE ASSHMQVIEA KEIAALDKIF KKSDTKSEVK
SEQKAEAKKE EPNKEQPKKE EPKKQSDQKR PQNNNQKRNP NHRPGSHNKP GTGGPSKNKK
GKGKGKQKPE PKQEVPVVKE TPSKITYEEG ITVGELAEKL GKDASEIVKN LFMVGIMANI
NQSLNQEAIE LICDEYGVEA ELEVVVDATD LETYFEDVDA NEEDIMERPP VVTIMGHVDH
GKTTLLDSIR NTRVTAGEAG GITQHIGAYQ IEYNDKPITF LDTPGHAAFT TMRARGAQVT
DITILVVAAD DGVMPQTVEA INHAKAAEVP IIVAVNKIDK PTANPDRVMQ ELGEHGLYPE
DWGGDTIFVQ LSAIKGDGID DLLEMIQLVT EVEELKANPK RTAIGTVIEA ELDKSRGPAA
SLLVQDGTLE IGDSIVVGNT FGRVRAMVND LGKRIKTAGP SLPVEITGLQ DVPLAGDRFV
VFKDEKKARR IGEARQQQNI LAQRQESQKV SLDNLFEQMK QGEMKDLNVI IKGDVQGSVE
ALAASLMKID VEGVNVRIIH TAVGAINESD VTLASASNGI IIGFNVRPDV NAKRAAEAEG
VDMRLHRIIY KVIEEIESAM KGMLDPEFEE KVIGQAEVRQ TINISKVGTV AGSYVTDGKI
TRDSQVRIIR DGIVVYEGQV DALKRFKDDV REVAQGYECG ITIENFNDIK EGDIFEAFVM
EEIKRA