IF2_PARMW
ID IF2_PARMW Reviewed; 650 AA.
AC Q7U8L9;
DT 15-DEC-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2003, sequence version 1.
DT 03-AUG-2022, entry version 115.
DE RecName: Full=Translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100};
GN Name=infB {ECO:0000255|HAMAP-Rule:MF_00100}; OrderedLocusNames=SYNW0597;
OS Parasynechococcus marenigrum (strain WH8102).
OC Bacteria; Cyanobacteria; Synechococcales; Prochlorococcaceae;
OC Parasynechococcus; Parasynechococcus marenigrum.
OX NCBI_TaxID=84588;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=WH8102;
RX PubMed=12917641; DOI=10.1038/nature01943;
RA Palenik B., Brahamsha B., Larimer F.W., Land M.L., Hauser L., Chain P.,
RA Lamerdin J.E., Regala W., Allen E.E., McCarren J., Paulsen I.T.,
RA Dufresne A., Partensky F., Webb E.A., Waterbury J.;
RT "The genome of a motile marine Synechococcus.";
RL Nature 424:1037-1042(2003).
CC -!- FUNCTION: One of the essential components for the initiation of protein
CC synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis
CC and promotes its binding to the 30S ribosomal subunits. Also involved
CC in the hydrolysis of GTP during the formation of the 70S ribosomal
CC complex. {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SIMILARITY: Belongs to the TRAFAC class translation factor GTPase
CC superfamily. Classic translation factor GTPase family. IF-2 subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_00100}.
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DR EMBL; BX569690; CAE07112.1; -; Genomic_DNA.
DR AlphaFoldDB; Q7U8L9; -.
DR SMR; Q7U8L9; -.
DR STRING; 84588.SYNW0597; -.
DR EnsemblBacteria; CAE07112; CAE07112; SYNW0597.
DR KEGG; syw:SYNW0597; -.
DR eggNOG; COG0532; Bacteria.
DR HOGENOM; CLU_006301_5_1_3; -.
DR OMA; NRDNRTG; -.
DR Proteomes; UP000001422; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-UniRule.
DR CDD; cd03702; IF2_mtIF2_II; 1.
DR Gene3D; 3.40.50.10050; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_00100_B; IF_2_B; 1.
DR InterPro; IPR044145; IF2_II.
DR InterPro; IPR006847; IF2_N.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR000178; TF_IF2_bacterial-like.
DR InterPro; IPR015760; TIF_IF2.
DR InterPro; IPR023115; TIF_IF2_dom3.
DR InterPro; IPR036925; TIF_IF2_dom3_sf.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR PANTHER; PTHR43381; PTHR43381; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF11987; IF-2; 1.
DR Pfam; PF04760; IF2_N; 1.
DR PRINTS; PR00315; ELONGATNFCT.
DR SUPFAM; SSF50447; SSF50447; 2.
DR SUPFAM; SSF52156; SSF52156; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00487; IF-2; 1.
DR TIGRFAMs; TIGR00231; small_GTP; 1.
DR PROSITE; PS51722; G_TR_2; 1.
DR PROSITE; PS01176; IF2; 1.
PE 3: Inferred from homology;
KW Cytoplasm; GTP-binding; Initiation factor; Nucleotide-binding;
KW Protein biosynthesis.
FT CHAIN 1..650
FT /note="Translation initiation factor IF-2"
FT /id="PRO_0000137271"
FT DOMAIN 142..314
FT /note="tr-type G"
FT REGION 1..40
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 151..158
FT /note="G1"
FT /evidence="ECO:0000250"
FT REGION 176..180
FT /note="G2"
FT /evidence="ECO:0000250"
FT REGION 201..204
FT /note="G3"
FT /evidence="ECO:0000250"
FT REGION 255..258
FT /note="G4"
FT /evidence="ECO:0000250"
FT REGION 291..293
FT /note="G5"
FT /evidence="ECO:0000250"
FT COMPBIAS 23..37
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 151..158
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 201..205
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 255..258
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
SQ SEQUENCE 650 AA; 70466 MW; 315F46C3010E0DEA CRC64;
MVLSASLARP AKPKSQRKAA PKPMAAMRKR KKETTRQRQR RRAMELRAAR EAKQVRPEML
IVPEDNLTVQ ELADMLSVES SEIIKSLFFK GIIATVTQTL DMNTIETVAE EFGVPVLQDD
VEEAAKKTVE MIEEADKEHL IRRPPVVTVM GHVDHGKTSL LDAIRKARVA AGEAGGITQH
IGAYQVEIDH NDEARKLTFL DTPGHEAFTA MRARGTKVTD VAVLVVAADD GVRPQTLEAI
SHARAAEVPI VVAINKIDKE GASPDRVKQE LSEQNLLAED WGGDVVMVPV SAIKGENIDK
LLEMLLLVTE VEDLQANPDR LARGTVIEAH LDKAKGPVAT LLVQNGTLKT GDVVAAGPVL
GKVRAMVDDN RQRLKEAGPS FAVEALGFSE VPTAGDEFEV YPDEKSARAV VGDRASDARA
TRLAQQMASR RVSLTAMSGQ ANEGELKELN LILKADVQGS VEAILGSLEQ LPKDEVQVRV
LLSAPGEVTE TDVDLAAASG AVIVGFNTSM ASGAKKAADA TGVDVRDYDV IYKLLEDIQL
AMEGLLEPEL VEEALGEAEV RAVFTIGKSA VAGCYVTTGK LQRNCKVRVH RGSQVVYDGD
LDSLRRNKDD VKEVATGFEC GVGTDRFANW EDGDRIEAFK MVTQRRKLTT