IF2_PROM3
ID IF2_PROM3 Reviewed; 1124 AA.
AC A2C6Q5;
DT 15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT 20-FEB-2007, sequence version 1.
DT 03-AUG-2022, entry version 93.
DE RecName: Full=Translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100};
GN Name=infB {ECO:0000255|HAMAP-Rule:MF_00100}; OrderedLocusNames=P9303_04131;
OS Prochlorococcus marinus (strain MIT 9303).
OC Bacteria; Cyanobacteria; Synechococcales; Prochlorococcaceae;
OC Prochlorococcus.
OX NCBI_TaxID=59922;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MIT 9303;
RX PubMed=18159947; DOI=10.1371/journal.pgen.0030231;
RA Kettler G.C., Martiny A.C., Huang K., Zucker J., Coleman M.L., Rodrigue S.,
RA Chen F., Lapidus A., Ferriera S., Johnson J., Steglich C., Church G.M.,
RA Richardson P., Chisholm S.W.;
RT "Patterns and implications of gene gain and loss in the evolution of
RT Prochlorococcus.";
RL PLoS Genet. 3:2515-2528(2007).
CC -!- FUNCTION: One of the essential components for the initiation of protein
CC synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis
CC and promotes its binding to the 30S ribosomal subunits. Also involved
CC in the hydrolysis of GTP during the formation of the 70S ribosomal
CC complex. {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SIMILARITY: Belongs to the TRAFAC class translation factor GTPase
CC superfamily. Classic translation factor GTPase family. IF-2 subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_00100}.
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DR EMBL; CP000554; ABM77165.1; -; Genomic_DNA.
DR AlphaFoldDB; A2C6Q5; -.
DR SMR; A2C6Q5; -.
DR STRING; 59922.P9303_04131; -.
DR PRIDE; A2C6Q5; -.
DR EnsemblBacteria; ABM77165; ABM77165; P9303_04131.
DR KEGG; pmf:P9303_04131; -.
DR HOGENOM; CLU_006301_5_1_3; -.
DR OMA; QVRPEMI; -.
DR BioCyc; PMAR59922:G1G80-384-MON; -.
DR Proteomes; UP000002274; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-UniRule.
DR CDD; cd03702; IF2_mtIF2_II; 1.
DR Gene3D; 3.40.50.10050; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_00100_B; IF_2_B; 1.
DR InterPro; IPR044145; IF2_II.
DR InterPro; IPR006847; IF2_N.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR000178; TF_IF2_bacterial-like.
DR InterPro; IPR015760; TIF_IF2.
DR InterPro; IPR023115; TIF_IF2_dom3.
DR InterPro; IPR036925; TIF_IF2_dom3_sf.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR PANTHER; PTHR43381; PTHR43381; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF11987; IF-2; 1.
DR Pfam; PF04760; IF2_N; 2.
DR PRINTS; PR00315; ELONGATNFCT.
DR SUPFAM; SSF50447; SSF50447; 2.
DR SUPFAM; SSF52156; SSF52156; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00487; IF-2; 1.
DR TIGRFAMs; TIGR00231; small_GTP; 1.
DR PROSITE; PS51722; G_TR_2; 1.
DR PROSITE; PS01176; IF2; 1.
PE 3: Inferred from homology;
KW Cytoplasm; GTP-binding; Initiation factor; Nucleotide-binding;
KW Protein biosynthesis.
FT CHAIN 1..1124
FT /note="Translation initiation factor IF-2"
FT /id="PRO_1000008298"
FT DOMAIN 615..787
FT /note="tr-type G"
FT REGION 32..451
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 480..523
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 624..631
FT /note="G1"
FT /evidence="ECO:0000250"
FT REGION 649..653
FT /note="G2"
FT /evidence="ECO:0000250"
FT REGION 674..677
FT /note="G3"
FT /evidence="ECO:0000250"
FT REGION 728..731
FT /note="G4"
FT /evidence="ECO:0000250"
FT REGION 764..766
FT /note="G5"
FT /evidence="ECO:0000250"
FT COMPBIAS 94..119
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 187..204
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 221..235
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 424..451
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 496..510
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 624..631
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 674..678
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 728..731
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
SQ SEQUENCE 1124 AA; 119452 MW; 48CE8078F7DB8A05 CRC64;
MTSSGKIRIY ELSKDLGLEN KDVLHAAEKL SIAAKSHSSS ISDDEAKRIR GLLRQGSAAN
SAPPSKSEPG KTILSVKKAA PTAIKDVAPP MRKATSSSEI SQVKPSAPAN PTPTSPERLS
RESVAHPAPP TRPVNPTTTP TSSPPKTAAR PVNAPISRPA TPSRPSAPTP RSANKPSSPV
PPSTGSKDPR AGQTSTSSKA TTVSGGGPRP KIISRPQSPA APGRSAPPAK PSIPSDRKAP
KPELVGRPKP KRPVVAPPSR PEPEGQRPDK KRPGISPRPI GGPNQRANTP QRPGAPIRQG
KTRPGQPRSA GNTLELVGKP IRRDRSDAGS AGRDSNNRPG APTRPGMPAG MRKPVAPGEL
MQLQKPTGRP GTPPPRRPDG TSVGTRGGSE GATPPVERPA SPTAPKRPGH RPAQAPAAGA
PRRPGRPDWD DSAKLEALRN KSPQKQRQKV HIIGENDDAL TAETSGYAGE QQAVVLTASL
ARPAKPKSQK KPASKPVAAL RKRKKETTRQ RQRRRAMELR AAREAKQVRP EMLIVPEANL
TVQELADMLS IESSEIIKSL FFKGITATVT QSLDLPTIEA VAEEFGVPVL QDDIEEAAKK
TTEMIEETDL AHLIRRPPVV TVMGHVDHGK TSLLDAIRKA RVAAVEAGGI TQHIGAYQVE
IDHGGQPRKI TFLDTPGHQA FTAMRARGTK VTDIAVLVVA ADDGVRPQTL EAISHARAAK
VPIIVAINKT DKEGASPERV KQELSDQNLL SEEWGGDVVM VPVSAIKGEN IDKLLEMILL
VTEVEDLQAN PDRLAKGTVI EAHLDKAKGP VATLLIQNGT LKTGDVLAAG PVLGKVRAMV
DDSGARLKQA GPADAVEALG FSEVPTAGDE FEVYPDEKSA RAVVGERASD ARATRLAQQM
ASRRVSLAAM SGQASDGELK ELNLILKADV QGSVEAILGS LEQLPKDEVQ VRVLLSAPGE
ITETDVDLAA ASGAVIVGFN TSMASGAKRA ADATGVDVRD YDVIYKLLED IQMAMEGLLE
PELVEESLGE AEVRAVFTIG KSAVAGCYIT TGKLQRNCRV RVRRAKQVVF EGDLDSLRRN
KDDVKEVATG FECGIGCDRF ANWEERDIIE AHKLVTKRRT LSSS