IF2_PROM4
ID IF2_PROM4 Reviewed; 1113 AA.
AC A9BCI5;
DT 24-MAR-2009, integrated into UniProtKB/Swiss-Prot.
DT 15-JAN-2008, sequence version 1.
DT 03-AUG-2022, entry version 86.
DE RecName: Full=Translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100};
GN Name=infB {ECO:0000255|HAMAP-Rule:MF_00100}; OrderedLocusNames=P9211_16161;
OS Prochlorococcus marinus (strain MIT 9211).
OC Bacteria; Cyanobacteria; Synechococcales; Prochlorococcaceae;
OC Prochlorococcus.
OX NCBI_TaxID=93059;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MIT 9211;
RX PubMed=18159947; DOI=10.1371/journal.pgen.0030231;
RA Kettler G.C., Martiny A.C., Huang K., Zucker J., Coleman M.L., Rodrigue S.,
RA Chen F., Lapidus A., Ferriera S., Johnson J., Steglich C., Church G.M.,
RA Richardson P., Chisholm S.W.;
RT "Patterns and implications of gene gain and loss in the evolution of
RT Prochlorococcus.";
RL PLoS Genet. 3:2515-2528(2007).
CC -!- FUNCTION: One of the essential components for the initiation of protein
CC synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis
CC and promotes its binding to the 30S ribosomal subunits. Also involved
CC in the hydrolysis of GTP during the formation of the 70S ribosomal
CC complex. {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SIMILARITY: Belongs to the TRAFAC class translation factor GTPase
CC superfamily. Classic translation factor GTPase family. IF-2 subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_00100}.
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DR EMBL; CP000878; ABX09547.1; -; Genomic_DNA.
DR RefSeq; WP_012196168.1; NC_009976.1.
DR AlphaFoldDB; A9BCI5; -.
DR SMR; A9BCI5; -.
DR STRING; 93059.P9211_16161; -.
DR EnsemblBacteria; ABX09547; ABX09547; P9211_16161.
DR KEGG; pmj:P9211_16161; -.
DR eggNOG; COG0532; Bacteria.
DR HOGENOM; CLU_006301_5_1_3; -.
DR OMA; QVRPEMI; -.
DR Proteomes; UP000000788; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-UniRule.
DR CDD; cd03702; IF2_mtIF2_II; 1.
DR Gene3D; 3.40.50.10050; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_00100_B; IF_2_B; 1.
DR InterPro; IPR044145; IF2_II.
DR InterPro; IPR006847; IF2_N.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR000178; TF_IF2_bacterial-like.
DR InterPro; IPR015760; TIF_IF2.
DR InterPro; IPR023115; TIF_IF2_dom3.
DR InterPro; IPR036925; TIF_IF2_dom3_sf.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR PANTHER; PTHR43381; PTHR43381; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF11987; IF-2; 1.
DR Pfam; PF04760; IF2_N; 2.
DR PRINTS; PR00315; ELONGATNFCT.
DR SUPFAM; SSF50447; SSF50447; 2.
DR SUPFAM; SSF52156; SSF52156; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00487; IF-2; 1.
DR TIGRFAMs; TIGR00231; small_GTP; 1.
DR PROSITE; PS51722; G_TR_2; 1.
DR PROSITE; PS01176; IF2; 1.
PE 3: Inferred from homology;
KW Cytoplasm; GTP-binding; Initiation factor; Nucleotide-binding;
KW Protein biosynthesis; Reference proteome.
FT CHAIN 1..1113
FT /note="Translation initiation factor IF-2"
FT /id="PRO_1000093813"
FT DOMAIN 605..777
FT /note="tr-type G"
FT REGION 56..446
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 470..504
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 614..621
FT /note="G1"
FT /evidence="ECO:0000250"
FT REGION 639..643
FT /note="G2"
FT /evidence="ECO:0000250"
FT REGION 664..667
FT /note="G3"
FT /evidence="ECO:0000250"
FT REGION 718..721
FT /note="G4"
FT /evidence="ECO:0000250"
FT REGION 754..756
FT /note="G5"
FT /evidence="ECO:0000250"
FT COMPBIAS 56..75
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 78..93
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 127..149
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 157..205
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 246..263
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 411..446
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 486..500
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 614..621
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 664..668
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 718..721
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
SQ SEQUENCE 1113 AA; 120927 MW; 8250709D4B650519 CRC64;
MTSSGKIRIY ELSRDLNLEN KDVLNAAKKL SIPAKSHSSS ISNAEANEIK AFLNKQSNQS
INNKTKQNSS KEILSLKKAG SKPIKDEITK KKANLPPKAS AESQSSKPRI ETSKAPVAPI
KPIKEPVQKA NTSNQSKGVI NNLIQPQKPS PLQPKQPKSI HLENNASKQN IEDNNNFQER
SPRTQLVQKP PLPTKNNEPP QQKTSIPKRP ITPPARPSKP ILDNRSSVKS RPIIEAPRKK
TGPDRNSPVQ PRTQNNQNRQ RIPNKPGKPP LRGNPPVELV GAPIRRSNKP NNNVKGPRDG
GYRPGPPNRN DPSNQQGHVK RDIKAPIRQR PGMPPGMRKP VAPGELMQLQ KPTGRSQPPA
PRRVGAPAPP SQRADSTKDR QGKSPGAKQP VNRPTPATAP KKPSHRPPGS GPTKRRSDWD
DAAKLEALRN KAPQKQRQKV HIIGENDDAL TTETSGFAAE QEAMVLSASL ARPAKPKSTK
KSNSKATVVT RKRKKESTRQ RQRRRAMELR AAREAKQVRP EMIIIPEGNL TVQELADKLS
VESSEIIKSL FFKGITATVT QSLDLSTIET VAEEFGVPVL QDDIEEAATK TAEMLDEADK
DHLIRRPPVV TVMGHVDHGK TSLLDAIRKA RVASGEAGGI TQHIGAYQVE LEHEKKKRKL
TFLDTPGHEA FTAMRARGTK VTDVAVLVVA ADDGVRPQTL EAISHARAAK VPIVVAINKI
DKEGASPDRV KQELSEQELV AEEWGGEVVM VPVSAIKGEN IDKLLEMVLL VTEVEDLQAN
PDRLAKGTVI EAHLDKAKGP VATLLIQNGT LKSGDVLAAG PVLGKVRAMV DENGIRLKEA
GPSCPVEALG FNEVPTAGDE FEVYPDEKSA RAVVGDRASD ARATRLAQQM ASRRVSLSSM
SGQANEGDLK ELNIILKADV QGSIEAILGS LEQLPKDEVQ VRVLLSAPGE VTETDVDLAA
ASGAVIVGFN TSMASGAKKA ADANSVDVRD YEVIYKLLED IQLAMEGLLE PDMVEESLGE
AEVRAIFSIG KSAVAGCYIT NGKLQRNCKV RVKRGSQIVF EGDLDSLRRN KDVVKDVGSG
FECGVGCDRF ANWKEGDIIQ GYKLVTKRRT LGP