IF2_RHILO
ID IF2_RHILO Reviewed; 860 AA.
AC Q98BI8;
DT 15-DEC-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2001, sequence version 1.
DT 03-AUG-2022, entry version 120.
DE RecName: Full=Translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100};
GN Name=infB {ECO:0000255|HAMAP-Rule:MF_00100}; OrderedLocusNames=mlr5554;
OS Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099)
OS (Mesorhizobium loti (strain MAFF 303099)).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC Phyllobacteriaceae; Mesorhizobium.
OX NCBI_TaxID=266835;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LMG 29417 / CECT 9101 / MAFF 303099;
RX PubMed=11214968; DOI=10.1093/dnares/7.6.331;
RA Kaneko T., Nakamura Y., Sato S., Asamizu E., Kato T., Sasamoto S.,
RA Watanabe A., Idesawa K., Ishikawa A., Kawashima K., Kimura T., Kishida Y.,
RA Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Mochizuki Y.,
RA Nakayama S., Nakazaki N., Shimpo S., Sugimoto M., Takeuchi C., Yamada M.,
RA Tabata S.;
RT "Complete genome structure of the nitrogen-fixing symbiotic bacterium
RT Mesorhizobium loti.";
RL DNA Res. 7:331-338(2000).
CC -!- FUNCTION: One of the essential components for the initiation of protein
CC synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis
CC and promotes its binding to the 30S ribosomal subunits. Also involved
CC in the hydrolysis of GTP during the formation of the 70S ribosomal
CC complex. {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SIMILARITY: Belongs to the TRAFAC class translation factor GTPase
CC superfamily. Classic translation factor GTPase family. IF-2 subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_00100}.
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DR EMBL; BA000012; BAB51984.1; -; Genomic_DNA.
DR RefSeq; WP_010913322.1; NC_002678.2.
DR AlphaFoldDB; Q98BI8; -.
DR SMR; Q98BI8; -.
DR STRING; 266835.14025383; -.
DR EnsemblBacteria; BAB51984; BAB51984; BAB51984.
DR KEGG; mlo:mlr5554; -.
DR PATRIC; fig|266835.9.peg.4416; -.
DR eggNOG; COG0532; Bacteria.
DR HOGENOM; CLU_006301_6_0_5; -.
DR OMA; NRDNRTG; -.
DR OrthoDB; 347113at2; -.
DR Proteomes; UP000000552; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-UniRule.
DR CDD; cd03702; IF2_mtIF2_II; 1.
DR Gene3D; 3.40.50.10050; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_00100_B; IF_2_B; 1.
DR InterPro; IPR013575; IF2_assoc_dom_bac.
DR InterPro; IPR044145; IF2_II.
DR InterPro; IPR006847; IF2_N.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR000178; TF_IF2_bacterial-like.
DR InterPro; IPR015760; TIF_IF2.
DR InterPro; IPR023115; TIF_IF2_dom3.
DR InterPro; IPR036925; TIF_IF2_dom3_sf.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR PANTHER; PTHR43381; PTHR43381; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF11987; IF-2; 1.
DR Pfam; PF08364; IF2_assoc; 1.
DR Pfam; PF04760; IF2_N; 1.
DR SUPFAM; SSF50447; SSF50447; 2.
DR SUPFAM; SSF52156; SSF52156; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00487; IF-2; 1.
DR TIGRFAMs; TIGR00231; small_GTP; 1.
DR PROSITE; PS51722; G_TR_2; 1.
DR PROSITE; PS01176; IF2; 1.
PE 3: Inferred from homology;
KW Cytoplasm; GTP-binding; Initiation factor; Nucleotide-binding;
KW Protein biosynthesis.
FT CHAIN 1..860
FT /note="Translation initiation factor IF-2"
FT /id="PRO_0000137240"
FT DOMAIN 358..525
FT /note="tr-type G"
FT REGION 1..265
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 367..374
FT /note="G1"
FT /evidence="ECO:0000250"
FT REGION 392..396
FT /note="G2"
FT /evidence="ECO:0000250"
FT REGION 413..416
FT /note="G3"
FT /evidence="ECO:0000250"
FT REGION 467..470
FT /note="G4"
FT /evidence="ECO:0000250"
FT REGION 503..505
FT /note="G5"
FT /evidence="ECO:0000250"
FT COMPBIAS 28..42
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 43..57
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 62..76
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 111..206
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 223..240
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 250..265
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 367..374
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 413..417
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 467..470
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
SQ SEQUENCE 860 AA; 93871 MW; DACD54AD41E3E597 CRC64;
MSDTKSGDDK TLSVTPMKTL TLKRPGMEQG TVRQNFSHGR TKSVVVETKK RKFSLPGDKP
EPAAAAPVPV FTPKPPVAAA PVVQEAPKAA PPPPPRAPVE RSGMVLNELS RSEMEARRRA
LEGSKVREVE DRQRAAEEAK RRAEDEERRK REREESARRQ AEEEARLQAE AESRRRAEEE
ARRRAPLAAE LATADEEEEV KPKRAGAGAP VRRLVTPEVA RPAKPTKGEE DRRRGKLTLN
SALSDEDARA RSLSSMRRRQ EKFKRAMHNE PREKVMREVI LPETITIQEL AQRMSERAVD
VVKFFMKQGQ ILKPGDVIDA DTAELVATEF GHTVRRVAES DIEEGLFNIA DNAEDLVPRP
PVVTIMGHVD HGKTSLLDAI RNANVVSGEA GGITQHIGAY QVEKNGQKIT FIDTPGHAAF
TAMRARGAQA TDIAILVVAA DDSVMPQTIE SISHAKAAGV PIIVAINKID KHDADPQKVR
SELLRHEVFV ESMGGEVLDV EVSATKGTNL DKLLEAILLQ AEILDLKANP DRTAEGVVIE
AQLDKGRGPV ATVLVQTGTL MPGDILVAGN EWGRVRALVN DRGEQIKEAP PAMPVEVLGL
QGTPLAGDRF AVVNNEARAR EITEYRQRLA REKAVAKHAG QRGSLEQMMS QLQTSGLKEF
PLVIKGDVQG SIEAINAALD KLGTDEVRAR IVHAGAGAIT ESDVSLAETS GAAIIGFNVR
ANVQARAAAA AAGIEIRYYS IIYNLVDDVK AALSGLLSPE RRETFIGNAE ILEIFDITKV
GKIAGCRVTE GKVERGAGVR LIRDNVVIHE GTLKTLKRFK DEVSEVPGGQ ECGMAFQNYE
DMRVGDIIEC FRVEMVTRTL