IF2_RICAH
ID IF2_RICAH Reviewed; 829 AA.
AC A8GNW1;
DT 15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT 13-NOV-2007, sequence version 1.
DT 03-AUG-2022, entry version 82.
DE RecName: Full=Translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100};
GN Name=infB {ECO:0000255|HAMAP-Rule:MF_00100}; OrderedLocusNames=A1C_04065;
OS Rickettsia akari (strain Hartford).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales;
OC Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group.
OX NCBI_TaxID=293614;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Hartford;
RA Madan A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S.,
RA Sanchez A., Whiting M., Dasch G., Eremeeva M.;
RT "Complete genome sequence of Rickettsia akari.";
RL Submitted (SEP-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: One of the essential components for the initiation of protein
CC synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis
CC and promotes its binding to the 30S ribosomal subunits. Also involved
CC in the hydrolysis of GTP during the formation of the 70S ribosomal
CC complex. {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SIMILARITY: Belongs to the TRAFAC class translation factor GTPase
CC superfamily. Classic translation factor GTPase family. IF-2 subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_00100}.
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DR EMBL; CP000847; ABV75086.1; -; Genomic_DNA.
DR RefSeq; WP_012149717.1; NC_009881.1.
DR AlphaFoldDB; A8GNW1; -.
DR SMR; A8GNW1; -.
DR STRING; 293614.A1C_04065; -.
DR PRIDE; A8GNW1; -.
DR EnsemblBacteria; ABV75086; ABV75086; A1C_04065.
DR KEGG; rak:A1C_04065; -.
DR eggNOG; COG0532; Bacteria.
DR HOGENOM; CLU_006301_10_2_5; -.
DR OMA; NRDNRTG; -.
DR Proteomes; UP000006830; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-UniRule.
DR CDD; cd03702; IF2_mtIF2_II; 1.
DR Gene3D; 3.40.50.10050; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_00100_B; IF_2_B; 1.
DR InterPro; IPR044145; IF2_II.
DR InterPro; IPR006847; IF2_N.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR000178; TF_IF2_bacterial-like.
DR InterPro; IPR015760; TIF_IF2.
DR InterPro; IPR023115; TIF_IF2_dom3.
DR InterPro; IPR036925; TIF_IF2_dom3_sf.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR PANTHER; PTHR43381; PTHR43381; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF11987; IF-2; 1.
DR Pfam; PF04760; IF2_N; 1.
DR SUPFAM; SSF50447; SSF50447; 2.
DR SUPFAM; SSF52156; SSF52156; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00487; IF-2; 1.
DR TIGRFAMs; TIGR00231; small_GTP; 1.
DR PROSITE; PS51722; G_TR_2; 1.
DR PROSITE; PS01176; IF2; 1.
PE 3: Inferred from homology;
KW Cytoplasm; GTP-binding; Initiation factor; Nucleotide-binding;
KW Protein biosynthesis.
FT CHAIN 1..829
FT /note="Translation initiation factor IF-2"
FT /id="PRO_1000008321"
FT DOMAIN 327..497
FT /note="tr-type G"
FT REGION 336..343
FT /note="G1"
FT /evidence="ECO:0000250"
FT REGION 361..365
FT /note="G2"
FT /evidence="ECO:0000250"
FT REGION 383..386
FT /note="G3"
FT /evidence="ECO:0000250"
FT REGION 437..440
FT /note="G4"
FT /evidence="ECO:0000250"
FT REGION 473..475
FT /note="G5"
FT /evidence="ECO:0000250"
FT BINDING 336..343
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 383..387
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 437..440
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
SQ SEQUENCE 829 AA; 90893 MW; 5A8EF35D99177FF4 CRC64;
MTDNQEIKPK KLTLGNSKLS LNKSFDSLTG AQSFVNAKSK TLVEVRKSST GSTTTISLNQ
ERNSLDHTAI DANKEEFNRR LSILKKAAEQ SKLNDTSQIS TLSKLASINQ SANSKIEPLE
TDKEVEQKQQ NNEENKVEVS AKIVQDNEHI PSQISKKKEE SFVKSPLVGM RTRYGIELEK
ELDKTADSKV VAPKIKLEEP KKFKKVDLFN MLGDDESGRT RSLASIKRAR EKEKRKLASQ
APEKVYREVT IPEVIGVGDL ANAMSERVAD VIKELMKLGV LANASQTIDT DTAELVATNL
GHTVKRVQES DVENVLISDD KVEDLRMRAP VVTVMGHVDH GKTSLLDALK STDIAASETG
GITQHIGAYR VTLADGRAIT FIDTPGHEAF SEMRSRGAKV TDIVIIVVAA DDGIKTQTVE
SINHAKAAGV PIIVAINKID KPDIDIERVK NELYVHEIIG EEAGGDVMVI PISALKKINL
EKLEEAILLV AEMKDLKASP FGPASGVVIE SKIEKGRGTL TTILVQRGTL RNGDIIIAGS
SYGKVKKMTN DKGLEIVEAT PSVPVEIQGL NEVPFAGDKF NVVQNEKQAK DIAEYRMRLA
KEKKISIAPR SSLEDLFLKA SGNSKIKELP LIIKGDVQGS VEAILGSLLK LPSDAIKLRI
LHSGVGPITE SDVSLAHASS AIIVGFNVRA GANALTAAEK EKVDIRYYSI IYNLIDDVKA
IMSGMLDPIV REQYIGSVEI RQIFNITKVG KIAGSYVTKG IIKQGASVRL LRDNVVIHEG
KLKTLKRFKD EVKEVREGYE CGIAFENYED IREGDTVEVF ELVQEQRQL