IF2_RUTMC
ID IF2_RUTMC Reviewed; 815 AA.
AC A1AV99;
DT 20-MAY-2008, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 1.
DT 03-AUG-2022, entry version 91.
DE RecName: Full=Translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100};
GN Name=infB {ECO:0000255|HAMAP-Rule:MF_00100}; OrderedLocusNames=Rmag_0054;
OS Ruthia magnifica subsp. Calyptogena magnifica.
OC Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts;
OC Candidatus Ruthia.
OX NCBI_TaxID=413404;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=17303757; DOI=10.1126/science.1138438;
RA Newton I.L.G., Woyke T., Auchtung T.A., Dilly G.F., Dutton R.J.,
RA Fisher M.C., Fontanez K.M., Lau E., Stewart F.J., Richardson P.M.,
RA Barry K.W., Saunders E., Detter J.C., Wu D., Eisen J.A., Cavanaugh C.M.;
RT "The Calyptogena magnifica chemoautotrophic symbiont genome.";
RL Science 315:998-1000(2007).
CC -!- FUNCTION: One of the essential components for the initiation of protein
CC synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis
CC and promotes its binding to the 30S ribosomal subunits. Also involved
CC in the hydrolysis of GTP during the formation of the 70S ribosomal
CC complex. {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SIMILARITY: Belongs to the TRAFAC class translation factor GTPase
CC superfamily. Classic translation factor GTPase family. IF-2 subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_00100}.
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DR EMBL; CP000488; ABL01856.1; -; Genomic_DNA.
DR RefSeq; WP_011737482.1; NC_008610.1.
DR AlphaFoldDB; A1AV99; -.
DR SMR; A1AV99; -.
DR STRING; 413404.Rmag_0054; -.
DR EnsemblBacteria; ABL01856; ABL01856; Rmag_0054.
DR KEGG; rma:Rmag_0054; -.
DR eggNOG; COG0532; Bacteria.
DR HOGENOM; CLU_006301_6_1_6; -.
DR OMA; NRDNRTG; -.
DR OrthoDB; 139681at2; -.
DR Proteomes; UP000002587; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-UniRule.
DR CDD; cd03702; IF2_mtIF2_II; 1.
DR Gene3D; 3.40.50.10050; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_00100_B; IF_2_B; 1.
DR InterPro; IPR044145; IF2_II.
DR InterPro; IPR006847; IF2_N.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR000178; TF_IF2_bacterial-like.
DR InterPro; IPR015760; TIF_IF2.
DR InterPro; IPR023115; TIF_IF2_dom3.
DR InterPro; IPR036925; TIF_IF2_dom3_sf.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR PANTHER; PTHR43381; PTHR43381; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF11987; IF-2; 1.
DR Pfam; PF04760; IF2_N; 1.
DR SUPFAM; SSF50447; SSF50447; 2.
DR SUPFAM; SSF52156; SSF52156; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00487; IF-2; 1.
DR TIGRFAMs; TIGR00231; small_GTP; 1.
DR PROSITE; PS51722; G_TR_2; 1.
DR PROSITE; PS01176; IF2; 1.
PE 3: Inferred from homology;
KW Cytoplasm; GTP-binding; Initiation factor; Nucleotide-binding;
KW Protein biosynthesis; Reference proteome.
FT CHAIN 1..815
FT /note="Translation initiation factor IF-2"
FT /id="PRO_0000335507"
FT DOMAIN 315..482
FT /note="tr-type G"
FT REGION 324..331
FT /note="G1"
FT /evidence="ECO:0000250"
FT REGION 349..353
FT /note="G2"
FT /evidence="ECO:0000250"
FT REGION 370..373
FT /note="G3"
FT /evidence="ECO:0000250"
FT REGION 424..427
FT /note="G4"
FT /evidence="ECO:0000250"
FT REGION 460..462
FT /note="G5"
FT /evidence="ECO:0000250"
FT BINDING 324..331
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 370..374
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 424..427
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
SQ SEQUENCE 815 AA; 88783 MW; B09F1129A4840082 CRC64;
MAHTVQTLSK LLKKTPDEVI TILANAGVDG KNSDSAISAE ERKILMSSLS KRSSSKSSMF
SFSKTGIKSS ANSASGAKVQ VKKKRLTKSA TATDEQPEIA VNEVAQAVQV ALDAGRDADK
KLLAQDAKRL EMVRLQKTQA EVLKAQKKTV KQAQAQEIEK KAEKPKMIDK FKEDKKPKRL
RNTLNGNNTR RQLHVARHNP NRKLKKKDRT RLSQKVQEEQ AQHAFQKPIE KVVHEIAIAE
NIKVTELAQK MATKAGEVLK VLMGMGVMAT LNDVIDQDTA MLVVEEMGHK SIASVEETVE
DVLIEQLKSS GNEKARPPVV TIMGHVDHGK TSLLDYIRQA KVTHGEAGGI TQHIGAYQVQ
SNGNTITFID TPGHAAFSKM RSRSANATDI VILVVAADDG VMPQTIESIK HVQTAGVPMI
VAINKIDKEG IDIDKIKQVL STHNVISEDW GGDVMMIPVS AYTGEGVDAL LDAISLTAEV
LEFSAVIKAL ARGTVLEARL EKGRGKVTTI LVQSGTLNKG DIMIAGFEYG KVKQIVDDKG
KVLKSATPSM PVEVLGLSGV PNSGDEVLVV DSERKAREVA DFRKAKNREA QLQKQQASKM
ENFLMKMEES NVSTVNVLLK ADVRGSAQAL IEALEGLSTD EAKVKVVSSG VGGINNTDIT
LAATSNALVL GFNVRADAVA RKTADNEGVR IEYYSIIYNL IDDVKTIMSG LLSPELSENI
IGIASVKSVF RSQKMGDIAG CMVEEGVVRR DSLIRVLRDS VVIFEGWLES LRRFKDNVNE
VKSGTECGIG VLNYTDIQPG DQIEVFERIE RIRTL