IF2_THEM4
ID IF2_THEM4 Reviewed; 692 AA.
AC A6LP48;
DT 15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT 24-JUL-2007, sequence version 1.
DT 03-AUG-2022, entry version 100.
DE RecName: Full=Translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100};
GN Name=infB {ECO:0000255|HAMAP-Rule:MF_00100}; OrderedLocusNames=Tmel_1865;
OS Thermosipho melanesiensis (strain DSM 12029 / CIP 104789 / BI429).
OC Bacteria; Thermotogae; Thermotogales; Fervidobacteriaceae; Thermosipho.
OX NCBI_TaxID=391009;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 12029 / CIP 104789 / BI429;
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E.,
RA Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Detter J.C.,
RA Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N.,
RA Mikhailova N., Nelson K., Gogarten J.P., Noll K., Richardson P.;
RT "Complete sequence of Thermosipho melanesiensis BI429.";
RL Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: One of the essential components for the initiation of protein
CC synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis
CC and promotes its binding to the 30S ribosomal subunits. Also involved
CC in the hydrolysis of GTP during the formation of the 70S ribosomal
CC complex. {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00100}.
CC -!- SIMILARITY: Belongs to the TRAFAC class translation factor GTPase
CC superfamily. Classic translation factor GTPase family. IF-2 subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_00100}.
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DR EMBL; CP000716; ABR31699.1; -; Genomic_DNA.
DR RefSeq; WP_012058057.1; NC_009616.1.
DR AlphaFoldDB; A6LP48; -.
DR SMR; A6LP48; -.
DR STRING; 391009.Tmel_1865; -.
DR EnsemblBacteria; ABR31699; ABR31699; Tmel_1865.
DR KEGG; tme:Tmel_1865; -.
DR eggNOG; COG0532; Bacteria.
DR HOGENOM; CLU_006301_5_1_0; -.
DR OMA; NRDNRTG; -.
DR Proteomes; UP000001110; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-UniRule.
DR CDD; cd03702; IF2_mtIF2_II; 1.
DR Gene3D; 3.40.50.10050; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_00100_B; IF_2_B; 1.
DR InterPro; IPR044145; IF2_II.
DR InterPro; IPR006847; IF2_N.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR000178; TF_IF2_bacterial-like.
DR InterPro; IPR015760; TIF_IF2.
DR InterPro; IPR023115; TIF_IF2_dom3.
DR InterPro; IPR036925; TIF_IF2_dom3_sf.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR PANTHER; PTHR43381; PTHR43381; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF11987; IF-2; 1.
DR Pfam; PF04760; IF2_N; 2.
DR SUPFAM; SSF50447; SSF50447; 2.
DR SUPFAM; SSF52156; SSF52156; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00487; IF-2; 1.
DR TIGRFAMs; TIGR00231; small_GTP; 1.
DR PROSITE; PS51722; G_TR_2; 1.
PE 3: Inferred from homology;
KW Cytoplasm; GTP-binding; Initiation factor; Nucleotide-binding;
KW Protein biosynthesis.
FT CHAIN 1..692
FT /note="Translation initiation factor IF-2"
FT /id="PRO_1000008367"
FT DOMAIN 184..352
FT /note="tr-type G"
FT REGION 193..200
FT /note="G1"
FT /evidence="ECO:0000250"
FT REGION 218..222
FT /note="G2"
FT /evidence="ECO:0000250"
FT REGION 239..242
FT /note="G3"
FT /evidence="ECO:0000250"
FT REGION 293..296
FT /note="G4"
FT /evidence="ECO:0000250"
FT REGION 330..332
FT /note="G5"
FT /evidence="ECO:0000250"
FT BINDING 193..200
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 239..243
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
FT BINDING 293..296
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00100"
SQ SEQUENCE 692 AA; 78185 MW; DDE0E93F7BE64191 CRC64;
MARLRVYELA RQLEMDTRDL MKELKELGIE VKSHMSYIDE ETVNLLLEMY SEEDELEDEL
IYEEYEEEVE KEIKRKSKEF VEKSEVVKKK KGVIKLEEED LKLDKFAQKI GIPQNRIIQD
FFMKGEILKP GQTLNLQLAK KIAKIYDIKI SFEVEEREEK KVNPLEEVER YFEEKYSEGE
GLSERPPVVT VMGHVDHGKT TLLDYIRNTR VAEREEGGIT QSIGAYQVEV NGKKITFIDT
PGHEIFTEMR ARGAQATDIV VLIVAADDGV MPQTVEAFNH AKSANVPIIV AINKIDKPNA
NVEKTKQELV NKINLIPEEW GGDTIVVPIS AKKGQNVDTL LEMILLVAEM QEIKGLPDGP
VRAVTIETRM ERGFGPVANV IIKDGVLHVG DYVISGKVMG KVKALVNDRG ERIREAGPSM
PVMIVGFEEL PDSHGMVYSV ESLSKAREIT SKIAELEQKE LRRKRHMKLE EILKMMEQSD
RKELNLILKA DTNGSVLALN GAINKLQSDE IKINVIHSGV GAITSSDVML ATASDAIIFG
FRVKADSKAR KMAEAEGIQI KTYSIVYKLI EDLKAALEGM LEPEEIEEIS GRGEIRKVFK
IKKVGSIAGV QMKEGYVESD GIVRLYREGK LIFEGKIESL KHYQQDVKKV EAPQECGIKL
EAFDDIKEGD ELEFYILKKV SKKLNFDEEK GE