IF2_THEMA
ID IF2_THEMA Reviewed; 690 AA.
AC Q9WZN3;
DT 30-MAY-2000, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1999, sequence version 1.
DT 03-AUG-2022, entry version 143.
DE RecName: Full=Translation initiation factor IF-2;
GN Name=infB; OrderedLocusNames=TM_0775;
OS Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826
OS / MSB8).
OC Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.
OX NCBI_TaxID=243274;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8;
RX PubMed=10360571; DOI=10.1038/20601;
RA Nelson K.E., Clayton R.A., Gill S.R., Gwinn M.L., Dodson R.J., Haft D.H.,
RA Hickey E.K., Peterson J.D., Nelson W.C., Ketchum K.A., McDonald L.A.,
RA Utterback T.R., Malek J.A., Linher K.D., Garrett M.M., Stewart A.M.,
RA Cotton M.D., Pratt M.S., Phillips C.A., Richardson D.L., Heidelberg J.F.,
RA Sutton G.G., Fleischmann R.D., Eisen J.A., White O., Salzberg S.L.,
RA Smith H.O., Venter J.C., Fraser C.M.;
RT "Evidence for lateral gene transfer between Archaea and Bacteria from
RT genome sequence of Thermotoga maritima.";
RL Nature 399:323-329(1999).
CC -!- FUNCTION: One of the essential components for the initiation of protein
CC synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis
CC and promotes its binding to the 30S ribosomal subunits. Also involved
CC in the hydrolysis of GTP during the formation of the 70S ribosomal
CC complex (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the TRAFAC class translation factor GTPase
CC superfamily. Classic translation factor GTPase family. IF-2 subfamily.
CC {ECO:0000305}.
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DR EMBL; AE000512; AAD35857.1; -; Genomic_DNA.
DR PIR; E72337; E72337.
DR RefSeq; NP_228584.1; NC_000853.1.
DR RefSeq; WP_004080913.1; NZ_CP011107.1.
DR AlphaFoldDB; Q9WZN3; -.
DR SMR; Q9WZN3; -.
DR STRING; 243274.THEMA_00775; -.
DR EnsemblBacteria; AAD35857; AAD35857; TM_0775.
DR KEGG; tma:TM0775; -.
DR eggNOG; COG0532; Bacteria.
DR InParanoid; Q9WZN3; -.
DR OMA; NRDNRTG; -.
DR OrthoDB; 347113at2; -.
DR Proteomes; UP000008183; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003743; F:translation initiation factor activity; IBA:GO_Central.
DR GO; GO:0006413; P:translational initiation; IBA:GO_Central.
DR CDD; cd03702; IF2_mtIF2_II; 1.
DR Gene3D; 3.40.50.10050; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_00100_B; IF_2_B; 1.
DR InterPro; IPR044145; IF2_II.
DR InterPro; IPR006847; IF2_N.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR000178; TF_IF2_bacterial-like.
DR InterPro; IPR015760; TIF_IF2.
DR InterPro; IPR023115; TIF_IF2_dom3.
DR InterPro; IPR036925; TIF_IF2_dom3_sf.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR PANTHER; PTHR43381; PTHR43381; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF11987; IF-2; 1.
DR Pfam; PF04760; IF2_N; 1.
DR SUPFAM; SSF50447; SSF50447; 2.
DR SUPFAM; SSF52156; SSF52156; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00487; IF-2; 1.
DR TIGRFAMs; TIGR00231; small_GTP; 1.
DR PROSITE; PS51722; G_TR_2; 1.
PE 3: Inferred from homology;
KW Cytoplasm; GTP-binding; Initiation factor; Nucleotide-binding;
KW Protein biosynthesis; Reference proteome.
FT CHAIN 1..690
FT /note="Translation initiation factor IF-2"
FT /id="PRO_0000137272"
FT DOMAIN 178..346
FT /note="tr-type G"
FT REGION 187..194
FT /note="G1"
FT /evidence="ECO:0000250"
FT REGION 212..216
FT /note="G2"
FT /evidence="ECO:0000250"
FT REGION 233..236
FT /note="G3"
FT /evidence="ECO:0000250"
FT REGION 287..290
FT /note="G4"
FT /evidence="ECO:0000250"
FT REGION 324..326
FT /note="G5"
FT /evidence="ECO:0000250"
FT BINDING 187..194
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000250"
FT BINDING 233..237
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000250"
FT BINDING 287..290
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000250"
SQ SEQUENCE 690 AA; 77774 MW; 8673FFFA20C37B60 CRC64;
MARLRVYELA RKLNMSPKEL LQELEELGVN VKSHMSYVDE EMANIIIDLL EEDNRKAKQP
SKPKKEKGEE EVEKEVVEKK KKKKITLKPD ELKLDIIAEK IGVPQNKIIQ DMFVKRGIAL
RPGQILKLEE VEQILKEYKI EIEIEEEQQT SVEEVDEFEL LEKRYQELYE KEKDKLVPRP
PVVTVMGHVD HGKTTLLDRI RSTRVAEREE GGITQSIGAY QVEVNGKKIT FIDTPGHELF
TEMRARGAQA TDIVVLVVAA DDGVMPQTIE AYNHAKAANV PIIVAINKID KPNANVEKTK
QELVEKLGLI PEEWGGDTIV VPISARTGQG VDELLEMILL VAEMNEIKCY PEGPARAVII
ESKLDKKMGP VASAIVKDGV LKVGDAVVAS NTYGRVRNLF DDNMRPIREA YPSQPVMILG
FEDVPDVHSN VYVVESAEKA KEIVEKRLQR LEAQKQSRKH INLEELMKMM QEKEKKVLNL
ILKADTYGSV AALKNAINKL QSKEIELNIV HAGVGEISTS DVMLAAAVDG VILGFRVKVN
NQARRLAEQE GVDVRTYSII YKLVEDLKLA LEGMLEPEEV EEVIGHGEIR KVFKISKVGK
VAGVQMLDGK ADRNGFVRIY RNGQLVFGGK IESLKHYKED VSVVEAPQEC GIKFAGFDDI
HEGDELEFYV IRKVKRKPTF VEEQADQEQK