IF3_GEOSE
ID IF3_GEOSE Reviewed; 172 AA.
AC P03000;
DT 21-JUL-1986, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 2.
DT 25-MAY-2022, entry version 112.
DE RecName: Full=Translation initiation factor IF-3 {ECO:0000255|HAMAP-Rule:MF_00080};
GN Name=infC {ECO:0000255|HAMAP-Rule:MF_00080};
OS Geobacillus stearothermophilus (Bacillus stearothermophilus).
OC Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.
OX NCBI_TaxID=1422;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=2779520; DOI=10.1007/bf00331290;
RA Pon C.L., Brombach M., Thamm S., Gualerzi C.O.;
RT "Cloning and characterization of a gene cluster from Bacillus
RT stearothermophilus comprising infC, rpmI and rplT.";
RL Mol. Gen. Genet. 218:355-357(1989).
RN [2]
RP PROTEIN SEQUENCE OF 2-172.
RC STRAIN=ATCC 29609 / DSM 2027 / NCA 1503 / NCIMB 8924;
RX PubMed=6884517; DOI=10.1016/0014-5793(83)80940-5;
RA Kimura M., Ernst H., Appelt K.;
RT "The primary structure of initiation factor IF3 from Bacillus
RT stearothermophilus.";
RL FEBS Lett. 160:78-81(1983).
RN [3]
RP STRUCTURE BY NMR, AND MUTAGENESIS.
RX PubMed=1742345; DOI=10.1016/0300-9084(91)90141-m;
RA Spurio R., Paci M., Pawlik R.T., la Teana A., Digiacco B.V., Pon C.L.,
RA Gualerzi C.O.;
RT "Site-directed mutagenesis and NMR spectroscopic approaches to the
RT elucidation of the structure-function relationships in translation
RT initiation factors IF1 and IF3.";
RL Biochimie 73:1001-1006(1991).
RN [4]
RP STRUCTURE BY NMR.
RX PubMed=9614948; DOI=10.1006/jmbi.1998.1736;
RA Hua Y., Raleigh D.P.;
RT "On the global architecture of initiation factor IF3: a comparative study
RT of the linker regions from the Escherichia coli protein and the Bacillus
RT stearothermophilus protein.";
RL J. Mol. Biol. 278:871-878(1998).
RN [5]
RP X-RAY CRYSTALLOGRAPHY (1.8 ANGSTROMS).
RX PubMed=7664745; DOI=10.1002/j.1460-2075.1995.tb00077.x;
RA Biou V., Shu F., Ramakrishnan V.;
RT "X-ray crystallography shows that translational initiation factor IF3
RT consists of two compact alpha/beta domains linked by an alpha-helix.";
RL EMBO J. 14:4056-4064(1995).
CC -!- FUNCTION: IF-3 binds to the 30S ribosomal subunit and shifts the
CC equilibrum between 70S ribosomes and their 50S and 30S subunits in
CC favor of the free subunits, thus enhancing the availability of 30S
CC subunits on which protein synthesis initiation begins.
CC -!- SUBUNIT: Monomer.
CC -!- SUBCELLULAR LOCATION: Cytoplasm.
CC -!- SIMILARITY: Belongs to the IF-3 family. {ECO:0000255|HAMAP-
CC Rule:MF_00080}.
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DR EMBL; X16188; CAA34312.1; -; Genomic_DNA.
DR PIR; S05346; FIBS3F.
DR PDB; 1TIF; X-ray; 1.80 A; A=1-78.
DR PDB; 1TIG; X-ray; 2.00 A; A=79-172.
DR PDB; 5ME0; EM; 13.50 A; Y=2-172.
DR PDB; 5ME1; EM; 13.50 A; Y=2-172.
DR PDBsum; 1TIF; -.
DR PDBsum; 1TIG; -.
DR PDBsum; 5ME0; -.
DR PDBsum; 5ME1; -.
DR AlphaFoldDB; P03000; -.
DR SMR; P03000; -.
DR IntAct; P03000; 1.
DR EvolutionaryTrace; P03000; -.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-UniRule.
DR Gene3D; 3.10.20.80; -; 1.
DR Gene3D; 3.30.110.10; -; 1.
DR HAMAP; MF_00080; IF_3; 1.
DR InterPro; IPR036788; T_IF-3_C_sf.
DR InterPro; IPR036787; T_IF-3_N_sf.
DR InterPro; IPR019813; Translation_initiation_fac3_CS.
DR InterPro; IPR001288; Translation_initiation_fac_3.
DR InterPro; IPR019815; Translation_initiation_fac_3_C.
DR InterPro; IPR019814; Translation_initiation_fac_3_N.
DR PANTHER; PTHR10938; PTHR10938; 1.
DR Pfam; PF00707; IF3_C; 1.
DR Pfam; PF05198; IF3_N; 1.
DR SUPFAM; SSF54364; SSF54364; 1.
DR SUPFAM; SSF55200; SSF55200; 1.
DR TIGRFAMs; TIGR00168; infC; 1.
DR PROSITE; PS00938; IF3; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Cytoplasm; Direct protein sequencing; Initiation factor;
KW Protein biosynthesis.
FT INIT_MET 1
FT /note="Removed"
FT /evidence="ECO:0000269|PubMed:6884517"
FT CHAIN 2..172
FT /note="Translation initiation factor IF-3"
FT /id="PRO_0000177481"
FT HELIX 8..10
FT /evidence="ECO:0007829|PDB:1TIF"
FT STRAND 14..19
FT /evidence="ECO:0007829|PDB:1TIF"
FT STRAND 25..30
FT /evidence="ECO:0007829|PDB:1TIF"
FT HELIX 31..40
FT /evidence="ECO:0007829|PDB:1TIF"
FT STRAND 44..49
FT /evidence="ECO:0007829|PDB:1TIF"
FT STRAND 52..54
FT /evidence="ECO:0007829|PDB:1TIF"
FT STRAND 56..60
FT /evidence="ECO:0007829|PDB:1TIF"
FT HELIX 62..75
FT /evidence="ECO:0007829|PDB:1TIF"
FT STRAND 85..90
FT /evidence="ECO:0007829|PDB:1TIG"
FT HELIX 96..111
FT /evidence="ECO:0007829|PDB:1TIG"
FT STRAND 115..121
FT /evidence="ECO:0007829|PDB:1TIG"
FT HELIX 129..143
FT /evidence="ECO:0007829|PDB:1TIG"
FT TURN 144..147
FT /evidence="ECO:0007829|PDB:1TIG"
FT STRAND 148..157
FT /evidence="ECO:0007829|PDB:1TIG"
FT STRAND 160..168
FT /evidence="ECO:0007829|PDB:1TIG"
SQ SEQUENCE 172 AA; 19809 MW; 379902B302ECD929 CRC64;
MSKDFIINEQ IRAREVRLID QNGDQLGIKS KQEALEIAAR RNLDLVLVAP NAKPPVCRIM
DYGKFRFEQQ KKEKEARKKQ KVINVKEVRL SPTIEEHDFN TKLRNARKFL EKGDKVKATI
RFKGRAITHK EIGQRVLDRL SEACADIAVV ETAPKMDGRN MFLVLAPKND NK