IFNG_PAROL
ID IFNG_PAROL Reviewed; 198 AA.
AC B3IXK1; B3IXK0;
DT 10-OCT-2018, integrated into UniProtKB/Swiss-Prot.
DT 02-SEP-2008, sequence version 1.
DT 25-MAY-2022, entry version 46.
DE RecName: Full=Interferon gamma {ECO:0000303|Ref.1};
DE Flags: Precursor;
GN Name=ifng {ECO:0000303|Ref.1};
OS Paralichthys olivaceus (Bastard halibut) (Hippoglossus olivaceus).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Carangaria; Pleuronectiformes; Pleuronectoidei; Paralichthyidae;
OC Paralichthys.
OX NCBI_TaxID=8255 {ECO:0000312|EMBL:BAG50577.1};
RN [1] {ECO:0000312|EMBL:BAG50577.1}
RP NUCLEOTIDE SEQUENCE [MRNA], AND INDUCTION.
RX DOI=10.1007/s12562-008-0019-3;
RA Matsuyama T., Fujiwara A., Sakai T., Nakayasu C.;
RT "Molecular cloning and expression analysis of interferon gamma gene in
RT Japanese flounder Paralichthys olivaceus.";
RL Fish. Sci. 75:253-255(2009).
RN [2] {ECO:0000305}
RP X-RAY CRYSTALLOGRAPHY (2.3 ANGSTROMS) OF 24-198, FUNCTION, SUBUNIT, AND
RP SUBCELLULAR LOCATION.
RX PubMed=29742458; DOI=10.1016/j.fsi.2018.05.008;
RA Zahradnik J., Kolarova L., Parizkova H., Kolenko P., Schneider B.;
RT "Interferons type II and their receptors R1 and R2 in fish species:
RT Evolution, structure, and function.";
RL Fish Shellfish Immunol. 79:140-152(2018).
CC -!- FUNCTION: Cytokine which binds to interferon gamma receptor 1 (ifngr1)
CC (PubMed:29742458). Also binds with lower affinity to interferon gamma
CC receptor 1-like (ifngr1l) (PubMed:29742458). Has activating effects on
CC macrophages and neutrophils (By similarity).
CC {ECO:0000250|UniProtKB:B5B3U4, ECO:0000269|PubMed:29742458}.
CC -!- SUBUNIT: Homodimer. {ECO:0000269|PubMed:29742458}.
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000305|PubMed:29742458}.
CC -!- INDUCTION: Strongly up-regulated in response to viral hemorrhagic
CC septicaemia virus infection. {ECO:0000269|Ref.1}.
CC -!- SIMILARITY: Belongs to the type II (or gamma) interferon family.
CC {ECO:0000305}.
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DR EMBL; AB435093; BAG50576.1; -; mRNA.
DR EMBL; AB435094; BAG50577.1; -; mRNA.
DR RefSeq; XP_019964836.1; XM_020109277.1.
DR PDB; 6F1E; X-ray; 2.30 A; A/B=24-198.
DR PDBsum; 6F1E; -.
DR AlphaFoldDB; B3IXK1; -.
DR SMR; B3IXK1; -.
DR GeneID; 109644000; -.
DR KEGG; pov:109644000; -.
DR CTD; 405790; -.
DR OrthoDB; 1236990at2759; -.
DR GO; GO:0005615; C:extracellular space; IEA:UniProtKB-KW.
DR GO; GO:0005125; F:cytokine activity; IEA:UniProtKB-KW.
DR GO; GO:0005133; F:interferon-gamma receptor binding; IDA:UniProtKB.
DR GO; GO:0042803; F:protein homodimerization activity; IDA:UniProtKB.
DR GO; GO:0006955; P:immune response; IEA:InterPro.
DR Gene3D; 1.20.1250.10; -; 1.
DR InterPro; IPR009079; 4_helix_cytokine-like_core.
DR InterPro; IPR002069; Interferon_gamma.
DR PANTHER; PTHR11419; PTHR11419; 1.
DR SUPFAM; SSF47266; SSF47266; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Cytokine; Glycoprotein; Secreted; Signal.
FT SIGNAL 1..23
FT /evidence="ECO:0000255"
FT CHAIN 24..198
FT /note="Interferon gamma"
FT /id="PRO_5002789827"
FT REGION 173..198
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 177..198
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CARBOHYD 31
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 42
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 174
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CONFLICT 98..99
FT /note="GS -> VA (in Ref. 1; BAG50576)"
FT /evidence="ECO:0000305"
FT HELIX 28..40
FT /evidence="ECO:0007829|PDB:6F1E"
FT HELIX 45..48
FT /evidence="ECO:0007829|PDB:6F1E"
FT STRAND 60..62
FT /evidence="ECO:0007829|PDB:6F1E"
FT HELIX 64..87
FT /evidence="ECO:0007829|PDB:6F1E"
FT HELIX 112..130
FT /evidence="ECO:0007829|PDB:6F1E"
FT HELIX 132..145
FT /evidence="ECO:0007829|PDB:6F1E"
FT HELIX 152..160
FT /evidence="ECO:0007829|PDB:6F1E"
FT HELIX 162..172
FT /evidence="ECO:0007829|PDB:6F1E"
FT STRAND 175..177
FT /evidence="ECO:0007829|PDB:6F1E"
FT HELIX 178..184
FT /evidence="ECO:0007829|PDB:6F1E"
SQ SEQUENCE 198 AA; 22822 MW; 91838A05F5459CCB CRC64;
MMVSTARAVV CLSLCLCVCQ VRGSHIPARM NKTIQNLLQH YNISNKDRFN GKPVFPKEPL
SGRMETKMLF MGGVLETYEK LIGQMLEQLP NTTPPTAGSR EGLNSAAPEV SVRTDLNYIL
KKVQELRTNR FKEQSKLLQG LHDLGDIKMN NFIIQSKALW ELQWMYEEAS SLSNNTKMQR
RRRRRRRQAR KVKTPTRA