IFT57_XENTR
ID IFT57_XENTR Reviewed; 411 AA.
AC Q28HX4;
DT 08-APR-2008, integrated into UniProtKB/Swiss-Prot.
DT 04-APR-2006, sequence version 1.
DT 03-AUG-2022, entry version 89.
DE RecName: Full=Intraflagellar transport protein 57 homolog;
GN Name=ift57; ORFNames=TEgg009c14.1;
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Egg;
RG Sanger Xenopus tropicalis EST/cDNA project;
RL Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Required for the formation of cilia. May also have pro-
CC apoptotic function (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm, cytoskeleton, cilium basal body
CC {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the IFT57 family. {ECO:0000305}.
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DR EMBL; CR760693; CAJ82224.1; -; mRNA.
DR RefSeq; NP_001016561.1; NM_001016561.2.
DR RefSeq; XP_012812437.1; XM_012956983.2.
DR RefSeq; XP_012812438.1; XM_012956984.2.
DR RefSeq; XP_017946753.1; XM_018091264.1.
DR AlphaFoldDB; Q28HX4; -.
DR SMR; Q28HX4; -.
DR STRING; 8364.ENSXETP00000055345; -.
DR PaxDb; Q28HX4; -.
DR Ensembl; ENSXETT00000055345; ENSXETP00000055345; ENSXETG00000026185.
DR GeneID; 549315; -.
DR KEGG; xtr:549315; -.
DR CTD; 55081; -.
DR eggNOG; KOG0972; Eukaryota.
DR HOGENOM; CLU_039132_0_0_1; -.
DR InParanoid; Q28HX4; -.
DR OMA; DWQMEVE; -.
DR OrthoDB; 839892at2759; -.
DR PhylomeDB; Q28HX4; -.
DR TreeFam; TF106156; -.
DR Reactome; R-XTR-5610787; Hedgehog 'off' state.
DR Reactome; R-XTR-5620924; Intraflagellar transport.
DR Proteomes; UP000008143; Chromosome 2.
DR Proteomes; UP000790000; Unplaced.
DR Bgee; ENSXETG00000026185; Expressed in testis and 12 other tissues.
DR GO; GO:0036064; C:ciliary basal body; ISS:UniProtKB.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR GO; GO:0030992; C:intraciliary transport particle B; ISS:UniProtKB.
DR GO; GO:0006919; P:activation of cysteine-type endopeptidase activity involved in apoptotic process; ISS:UniProtKB.
DR GO; GO:0006915; P:apoptotic process; ISS:UniProtKB.
DR GO; GO:0042981; P:regulation of apoptotic process; ISS:UniProtKB.
DR InterPro; IPR019530; Intra-flagellar_transport_57.
DR PANTHER; PTHR16011; PTHR16011; 1.
DR Pfam; PF10498; IFT57; 1.
PE 2: Evidence at transcript level;
KW Apoptosis; Cell projection; Cilium; Coiled coil; Cytoplasm; Cytoskeleton;
KW Reference proteome.
FT CHAIN 1..411
FT /note="Intraflagellar transport protein 57 homolog"
FT /id="PRO_0000328888"
FT REGION 317..408
FT /note="pDED"
FT COILED 161..185
FT /evidence="ECO:0000255"
FT COILED 261..351
FT /evidence="ECO:0000255"
SQ SEQUENCE 411 AA; 47357 MW; 03A8E0CDD85DA217 CRC64;
MSEDSRRVED DDRGPGAAYQ AFLMMEDLLD KLKLLSYEDE VLRKQNMKPL SRHYFALPTN
PGEQFYMFCT LAAWLISKAG HHFDQPQEYD DPNATISNIL SELRSFGYSV DFPPSRLKAG
YGEQVCYVLD CFAEEVLKHI HFSWKRPTYP TEEQDEENVI EDDAELTLNK IEDEIAEEDS
DNDQEHFIDL NALSAQTQKL NTKESSKPEE ILESNTDAAE WILEVERVLP QLKVTIRTDN
KDWRVHVDQM HQHRDGIDTS LKETKGYLDK LHNEVAKALE KVSSREKYIN NQLEQLVQEY
RSVQAQLSEA KERYQQASGG VTERTRILAE ITEELEKVKQ EMEEKGSSMT DGAPLVKIKQ
ALTKLKHEIV QMDIRTGVVE HTLLQSTLKE KSNMTRDMHA LNIPESSIGA Y