IKZF5_CHICK
ID IKZF5_CHICK Reviewed; 421 AA.
AC Q5ZLR2;
DT 11-SEP-2007, integrated into UniProtKB/Swiss-Prot.
DT 23-NOV-2004, sequence version 1.
DT 03-AUG-2022, entry version 122.
DE RecName: Full=Zinc finger protein Pegasus;
DE AltName: Full=Ikaros family zinc finger protein 5;
GN Name=IKZF5; ORFNames=RCJMB04_5c6;
OS Gallus gallus (Chicken).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae;
OC Phasianinae; Gallus.
OX NCBI_TaxID=9031;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=CB; TISSUE=Bursa of Fabricius;
RX PubMed=15642098; DOI=10.1186/gb-2004-6-1-r6;
RA Caldwell R.B., Kierzek A.M., Arakawa H., Bezzubov Y., Zaim J., Fiedler P.,
RA Kutter S., Blagodatski A., Kostovska D., Koter M., Plachy J., Carninci P.,
RA Hayashizaki Y., Buerstedde J.-M.;
RT "Full-length cDNAs from chicken bursal lymphocytes to facilitate gene
RT function analysis.";
RL Genome Biol. 6:R6.1-R6.9(2005).
CC -!- FUNCTION: Transcriptional repressor that binds the core 5'GNNTGTNG-3'
CC DNA consensus sequence. {ECO:0000250|UniProtKB:Q9H5V7}.
CC -!- SUBUNIT: Probably self-associates. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:Q9H5V7}.
CC -!- MISCELLANEOUS: 'Pegasus' was the winged horse in Greek mythology.
CC -!- SIMILARITY: Belongs to the Ikaros C2H2-type zinc-finger protein family.
CC {ECO:0000305}.
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DR EMBL; AJ719672; CAG31331.1; -; mRNA.
DR RefSeq; NP_001026766.1; NM_001031595.1.
DR AlphaFoldDB; Q5ZLR2; -.
DR SMR; Q5ZLR2; -.
DR STRING; 9031.ENSGALP00000042828; -.
DR PaxDb; Q5ZLR2; -.
DR Ensembl; ENSGALT00000076257; ENSGALP00000056934; ENSGALG00000032289.
DR GeneID; 430882; -.
DR KEGG; gga:430882; -.
DR CTD; 64376; -.
DR VEuPathDB; HostDB:geneid_430882; -.
DR eggNOG; KOG1721; Eukaryota.
DR GeneTree; ENSGT00940000155035; -.
DR HOGENOM; CLU_734778_0_0_1; -.
DR InParanoid; Q5ZLR2; -.
DR OMA; THNQRNY; -.
DR OrthoDB; 1318335at2759; -.
DR PhylomeDB; Q5ZLR2; -.
DR PRO; PR:Q5ZLR2; -.
DR Proteomes; UP000000539; Chromosome 6.
DR Bgee; ENSGALG00000032289; Expressed in spermatid and 12 other tissues.
DR GO; GO:0005634; C:nucleus; ISS:UniProtKB.
DR GO; GO:0032991; C:protein-containing complex; IEA:Ensembl.
DR GO; GO:0003682; F:chromatin binding; ISS:UniProtKB.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IBA:GO_Central.
DR GO; GO:0001227; F:DNA-binding transcription repressor activity, RNA polymerase II-specific; IEA:Ensembl.
DR GO; GO:0019904; F:protein domain specific binding; IEA:Ensembl.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0008270; F:zinc ion binding; IEA:Ensembl.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR SMART; SM00355; ZnF_C2H2; 5.
DR SUPFAM; SSF57667; SSF57667; 3.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 3.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 3.
PE 2: Evidence at transcript level;
KW DNA-binding; Metal-binding; Nucleus; Reference proteome; Repeat; Repressor;
KW Transcription; Transcription regulation; Zinc; Zinc-finger.
FT CHAIN 1..421
FT /note="Zinc finger protein Pegasus"
FT /id="PRO_0000299474"
FT ZN_FING 82..104
FT /note="C2H2-type 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 110..132
FT /note="C2H2-type 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 138..161
FT /note="C2H2-type 3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 366..388
FT /note="C2H2-type 4"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 394..418
FT /note="C2H2-type 5"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT REGION 35..55
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 229..249
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 292..358
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 294..354
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 421 AA; 46943 MW; D88885A337F2542E CRC64;
MGEKKPEPLD FVKDFQEYLT QQTHHVNMIS GSVSGDKEAE TLQGAGTEGD QNGLDHPSVE
VSLDENSGML VDGFERTFDG KLKCRYCNYA SKGTARLIEH IRIHTGEKPH RCHLCPFASA
YERHLEAHMR SHTGEKPYKC ELCSFRCSDR SNLSHHRRRK HKMVPIKGTR SSLSSKKMWG
VLQKKTSNLG YSRRALINLS PPSMVVHKPD YLNDFTHEIP NIQTEAYESM TKSSQTSGLP
RDPQDLMVDN PLNQLSTLAG QLSSLPPENQ NERGCSPDVV TCQDEKPFMM QQPATPAVVS
SVSASIAQSS SPTSPDPRPA HNQRNYSPVA GPSSDRSAHT STPSISNSQP STPAPTLPVQ
DPQLLHHCQH CDMYFADNIL YTIHMGCHGF ENPFQCNICG CKCKNKYDFA CHFARGQHSQ
H