APMA_PENBR
ID APMA_PENBR Reviewed; 2346 AA.
AC A0A1W6BT53;
DT 11-DEC-2019, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2017, sequence version 1.
DT 03-AUG-2022, entry version 21.
DE RecName: Full=N-benzoylphenylalaninol synthetase apmA {ECO:0000303|PubMed:29719714};
DE EC=1.-.-.- {ECO:0000269|PubMed:29719714};
DE EC=6.3.2.- {ECO:0000269|PubMed:29719714};
DE AltName: Full=Asperphenamate biosynthesis cluster protein A {ECO:0000303|PubMed:29719714};
DE AltName: Full=Nonribosomal peptide synthase apmA {ECO:0000303|PubMed:29719714};
GN Name=apmA {ECO:0000303|PubMed:29719714};
OS Penicillium brevicompactum.
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC Eurotiomycetidae; Eurotiales; Aspergillaceae; Penicillium.
OX NCBI_TaxID=5074;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], IDENTIFICATION, DISRUPTION PHENOTYPE,
RP FUNCTION, CATALYTIC ACTIVITY, DOMAIN, AND PATHWAY.
RX PubMed=29719714; DOI=10.1039/c7sc02396k;
RA Li W., Fan A., Wang L., Zhang P., Liu Z., An Z., Yin W.B.;
RT "Asperphenamate biosynthesis reveals a novel two-module NRPS system to
RT synthesize amino acid esters in fungi.";
RL Chem. Sci. 9:2589-2594(2018).
CC -!- FUNCTION: Nonribosomal peptide synthase; part of the gene cluster that
CC mediates the biosynthesis of asperphenamate, a rare linear amino acid
CC ester that exhibits antitumor activity towards a number of cell lines
CC (PubMed:29719714). The structure of asperphenamate contains two
CC subunits, N-benzoylphenylalanine and N-benzoylphenylalaninol, which are
CC connected by an inter-molecular ester bond (PubMed:29719714). The first
CC step of asperphenamate biosynthesis is the generation of N-
CC benzoylphenylalaninol by the nonribosomal peptide synthase apmA
CC (PubMed:29719714). Using phenylalanine and benzoic acid as substrates,
CC apmA catalyzes amide bond formation and tethers the intermediate into
CC the NRPS chain. Then, the terminal R domain of apmA catalyzes the
CC reduction reaction to get the shunt product N-benzoylphenylalaninol
CC (PubMed:29719714). Subsequently, the nonribosomal peptide synthase apmB
CC activates the same substrates as does apmA (phenylalanine and benzoic
CC acid) to produce N-benzoylphenylalanine before condensing N-
CC benzoylphenylalanine and N-benzoylphenylalaninol to release
CC asperphenamate (PubMed:29719714). {ECO:0000269|PubMed:29719714}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=2 AH2 + 2 ATP + benzoate + L-phenylalanine = 2 A + 2 AMP + 2
CC diphosphate + H(+) + N-benzoyl-L-phenylalaninol;
CC Xref=Rhea:RHEA:59476, ChEBI:CHEBI:13193, ChEBI:CHEBI:15378,
CC ChEBI:CHEBI:16150, ChEBI:CHEBI:17499, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:33019, ChEBI:CHEBI:58095, ChEBI:CHEBI:145107,
CC ChEBI:CHEBI:456215; Evidence={ECO:0000269|PubMed:29719714};
CC PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:59477;
CC Evidence={ECO:0000269|PubMed:29719714};
CC -!- PATHWAY: Secondary metabolite biosynthesis.
CC {ECO:0000269|PubMed:29719714}.
CC -!- DOMAIN: NRP synthetases are composed of discrete domains (adenylation
CC (A), thiolation (T) or peptidyl carrier protein (PCP) and condensation
CC (C) domains) which when grouped together are referred to as a single
CC module. Each module is responsible for the recognition (via the A
CC domain) and incorporation of a single amino acid into the growing
CC peptide product. Thus, an NRP synthetase is generally composed of one
CC or more modules and can terminate in a thioesterase domain (TE) that
CC releases the newly synthesized peptide from the enzyme. Occasionally,
CC methyltransferase domains (responsible for amino acid methylation) are
CC present within the NRP synthetase. ApmA has the following architecture:
CC A-T-C-A-T-R with a C-terminal reductase (R)-domain that acts in the
CC reductive release of the shunt product N-benzoylphenylalaninol in the
CC two-modular NRPS apmA. {ECO:0000305|PubMed:29719714}.
CC -!- DISRUPTION PHENOTYPE: Completely abolishes the production of
CC asperphenamate. {ECO:0000269|PubMed:29719714}.
CC -!- SIMILARITY: Belongs to the NRP synthetase family. {ECO:0000305}.
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DR EMBL; KX443597; ARJ55264.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1W6BT53; -.
DR SMR; A0A1W6BT53; -.
DR GO; GO:0016874; F:ligase activity; IEA:UniProtKB-KW.
DR GO; GO:0016491; F:oxidoreductase activity; IEA:UniProtKB-KW.
DR GO; GO:0009058; P:biosynthetic process; IEA:UniProt.
DR Gene3D; 1.10.1200.10; -; 1.
DR Gene3D; 3.30.300.30; -; 2.
DR Gene3D; 3.30.559.10; -; 1.
DR Gene3D; 3.40.50.12780; -; 1.
DR InterPro; IPR010071; AA_adenyl_domain.
DR InterPro; IPR036736; ACP-like_sf.
DR InterPro; IPR045851; AMP-bd_C_sf.
DR InterPro; IPR020845; AMP-binding_CS.
DR InterPro; IPR000873; AMP-dep_Synth/Lig.
DR InterPro; IPR042099; ANL_N_sf.
DR InterPro; IPR023213; CAT-like_dom_sf.
DR InterPro; IPR001242; Condensatn.
DR InterPro; IPR013120; Far_NAD-bd.
DR InterPro; IPR036291; NAD(P)-bd_dom_sf.
DR InterPro; IPR009081; PP-bd_ACP.
DR Pfam; PF00501; AMP-binding; 2.
DR Pfam; PF00668; Condensation; 1.
DR Pfam; PF07993; NAD_binding_4; 1.
DR Pfam; PF00550; PP-binding; 2.
DR SUPFAM; SSF47336; SSF47336; 2.
DR SUPFAM; SSF51735; SSF51735; 1.
DR TIGRFAMs; TIGR01733; AA-adenyl-dom; 2.
DR PROSITE; PS00455; AMP_BINDING; 2.
DR PROSITE; PS50075; CARRIER; 1.
PE 1: Evidence at protein level;
KW Ligase; Oxidoreductase; Phosphopantetheine; Phosphoprotein; Repeat.
FT CHAIN 1..2346
FT /note="N-benzoylphenylalaninol synthetase apmA"
FT /id="PRO_0000448646"
FT DOMAIN 784..860
FT /note="Carrier 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00258"
FT DOMAIN 1842..1924
FT /note="Carrier 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00258"
FT REGION 263..652
FT /note="Adenylation 1"
FT /evidence="ECO:0000255, ECO:0000305|PubMed:29719714"
FT REGION 896..1306
FT /note="Condensation"
FT /evidence="ECO:0000255, ECO:0000305|PubMed:29719714"
FT REGION 1330..1713
FT /note="Adenylation 2"
FT /evidence="ECO:0000255, ECO:0000305|PubMed:29719714"
FT REGION 1960..2311
FT /note="Reductase (R) domain"
FT /evidence="ECO:0000255, ECO:0000305|PubMed:29719714"
FT MOD_RES 821
FT /note="O-(pantetheine 4'-phosphoryl)serine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00258"
FT MOD_RES 1883
FT /note="O-(pantetheine 4'-phosphoryl)serine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00258"
SQ SEQUENCE 2346 AA; 255547 MW; C28D56FECCC5A28A CRC64;
MPSIVIDDAD RLRQLWTQLV TDVTPSHLPS GLFSKRETKS TVGRLNVPMQ LSAIYDCCQQ
CDVSPLNVVQ AAWTAVLRSY SGADNVMFAG IGMNPRSTKQ QWTNTSVSLA RLEQDSSVIS
VLDTTQEEGL LQAESMVSVP EALDIFSSLE PKPCNSAIWL KDAQSKSELS LTDVVNEKTF
DYAVQIDASL TQLDLVFHKP TVSRSQAQYI ASTFADYLQS VCLDPYQTAS TVCHPSELDM
MQIDTWNRIL PKGSEVCVDQ LIESAAQKSP DAQALVGWDG EMSYSQFNQA ANKMAAYFDS
VGVQRGELVP ICFEKSVWTI VTMIGLWKLG AGWVPLDPKH PRQRLETIIE SVGARTVIAS
ASNKDLVQDI ASQVLILDPS QIQSAPEVDF KSRSQPHDTS FVMFTSGSTG KPKGVVHDHA
SVASSALNHA SAMNISNNTR ALQFGAYTFI ISTFEIFTTL IFGGCLCIPS DHDRHTDIRP
AIRSFEANWA IFTPSFARSL HHEDIPSLDT LLVAGEAVAQ DIIDRWAPVA QLINIYGASE
CSVVMIGRMV ADTPRSCIGR ATGGLSWLVD PNDHDRLVPI GSVGELVIEG PILARGYLAD
PEKTQAVYIE NPVWASQSGN TRRFYKTGDL ARYGDDGRVH LIGRKDLQVK IRGQRVELTE
IEAHMRAIDN SVKTAVAMVR PGGKAMLAAF ISNQSGFGPE FPHPFYSAPD DKQSVVSLAG
QMSKKLTLQL PPYMIPSVFL PLAYMPLTAS GKTDRRLIAS FGDSLTLTEL AAVAGNGKVT
ERRMPTTTTE MTLRQIWAEI LHCPVDEIGA EDNFFHLGGD SIEAMNLTRR CRAEGFQLQV
GDILGNLVLS DMAKAMTSTR SLKPSITTPF ELLGDDTDAV RANILSATGL PAGLLQDAYP
CSPLQMGLMA LSAKIPGSYV ARHTLELPSS VTVGRFKEVW GMIVESNDVL RTRIVETDEY
GSVQVVNRAP LVWAHDTDLA KYIELDEKIP MQIGDALAHF GIIAGPTNTF VLTIHHSIYD
GMSLEMIFND LVHAFEGVVP PVRTQFRDFI KEVVERNADK ATEEYWRGEF AEGDMTTFPS
LPSASHQPLA NDSFVHTLQL NRKGPSDFTS ATLIRAAWSL VQARYCDSPE TVFGCTLSGR
NAPVPGVEDV VGAVIATVPI KAKVDGEQPV AEWLQQINSH SVEMTPAQNY GLQNIARVAE
GAAAACNFQS LLVIQPATSV AEDSIMQPFS APQANFSTVA LTLECSLAVD GSIQIHVHFD
DTVLPRLEVQ RIVRQFEHVL QQLASAPAGK LSDIEIISPQ DKENLLQWNR DLAEPVNECV
HRLISQNNFS QPNAPAICAW DGELTYTELE SLSSKLAAHL INVGVGPDVF VPLCFEKSMW
TIVAMLATLK AGGAFVAMDA SQPISRMQSV VKDVNAQVVL YSEEQLSRAP GLAAKAIAVG
PGMRELNTPR TPPTPVAPSN AAYVIFSSGS TGTPKGSVIE HRAFCTAAVS QKEGLQMGSR
VLQFASYAFD ASILEILSTL VQGGCVCVPS ESERRGNIAE AITRMNVDWA VLTPSFVNTI
DPSSVPTLST LALAGEAMSA AHVAAWTPYV RLVNGYGPSE CCVCTTSNRR VLPGTASNNI
GTAVGSASWI TDRDDHNKLA PIGAIGELLI EGNILARHYL NNPEKTDAAF ITQPAWLPGH
RSTRVYKTGD LVKYAPDGSI LFIGRKDTQV KIRGQRVELG EIEYHLNLPA DVSQSVVSYP
KSGLYAQKLV GILELNSTAG SDLSVVPSAE FQRSGFQLSS LTHTLSETLP VHMIPVIWIV
VRKIPSSSST KIDRKVVDQW LTKLPSNFEP TLGITREGPT TSALRASEDK ALAISKKIES
LVNREDSPLH GRDFNISSMG IDSVQVISLA SFIKQSYGVK VDVSRVLDGQ MTVRGLAAFI
DAELSGTVQE ALPAFDAMKE ASALVNDIIK NSMPQKTVFV TGGTGFLGTQ ILRQLCDRPD
VGRVIAHVRA NSPSDAFIRI KDAAVRAQWW SDYYLTKLDV WCGNLASPKL GLKPKQWASL
SGESPNDGLV NGIIHAGAAV NWNAGTEILR AANVNSTAEL IKAAISSPAR PRLSYVSGGS
RWSVGENDQD IANEIAHANG YAQTKYLSEL LVKQFAAKYP NQFAIVKPGL ILGTPEEGVA
NTDDFVWRLA SGVVDACAFS DDYANAWMYV TSSTRVAEET IAQVFCPAGS MKTVTYMTEG
ITEREFWEIF HGELKYPLRK VDHETWMETM RKSIQKDTSS HPLWPVSQVF DALQGRLGGE
PLQDASFVSP SQKQHVKATI RRNVQFLVEA GFIASPTGKK MKYMADKVFK RSGNVWENVK
RMTITA