IMND2_VIBCY
ID IMND2_VIBCY Reviewed; 399 AA.
AC A6AMN2;
DT 09-JUL-2014, integrated into UniProtKB/Swiss-Prot.
DT 24-JUL-2007, sequence version 1.
DT 03-AUG-2022, entry version 50.
DE RecName: Full=D-galactonate dehydratase family member A1Q3065;
GN ORFNames=A1Q_3065;
OS Vibrio campbellii (strain HY01).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=410291;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=HY01;
RA Heidelberg J., Sebastian Y.;
RT "Annotation of Vibrio harveyi HY01.";
RL Submitted (JAN-2007) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP FUNCTION, AND LACK OF D-MANNONATE DEHYDRATASE ACTIVITY.
RC STRAIN=HY01;
RX PubMed=24697546; DOI=10.1021/bi500264p;
RA Wichelecki D.J., Balthazor B.M., Chau A.C., Vetting M.W., Fedorov A.A.,
RA Fedorov E.V., Lukk T., Patskovsky Y.V., Stead M.B., Hillerich B.S.,
RA Seidel R.D., Almo S.C., Gerlt J.A.;
RT "Discovery of function in the enolase superfamily: D-mannonate and D-
RT gluconate dehydratases in the D-mannonate dehydratase subgroup.";
RL Biochemistry 53:2722-2731(2014).
CC -!- FUNCTION: Has no detectable activity with D-mannonate and with a panel
CC of 70 other acid sugars (in vitro), in spite of the conservation of the
CC residues that are expected to be important for catalytic activity and
CC cofactor binding. May have evolved a divergent function.
CC {ECO:0000269|PubMed:24697546}.
CC -!- SIMILARITY: Belongs to the mandelate racemase/muconate lactonizing
CC enzyme family. GalD subfamily. {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AAWP01000007; EDL70093.1; -; Genomic_DNA.
DR AlphaFoldDB; A6AMN2; -.
DR SMR; A6AMN2; -.
DR HOGENOM; CLU_030273_6_1_6; -.
DR GO; GO:0000287; F:magnesium ion binding; ISS:UniProtKB.
DR GO; GO:0009063; P:cellular amino acid catabolic process; IEA:InterPro.
DR Gene3D; 3.20.20.120; -; 1.
DR Gene3D; 3.30.390.10; -; 1.
DR InterPro; IPR034589; D-mannonate_dehydratase-like.
DR InterPro; IPR036849; Enolase-like_C_sf.
DR InterPro; IPR029017; Enolase-like_N.
DR InterPro; IPR029065; Enolase_C-like.
DR InterPro; IPR018110; Mandel_Rmase/mucon_lact_enz_CS.
DR InterPro; IPR013342; Mandelate_racemase_C.
DR InterPro; IPR034593; Mandelate_racemase_DgoD-like.
DR InterPro; IPR013341; Mandelate_racemase_N_dom.
DR PANTHER; PTHR48080; PTHR48080; 1.
DR PANTHER; PTHR48080:SF6; PTHR48080:SF6; 1.
DR Pfam; PF13378; MR_MLE_C; 1.
DR Pfam; PF02746; MR_MLE_N; 1.
DR SFLD; SFLDG00033; mannonate_dehydratase; 1.
DR SMART; SM00922; MR_MLE; 1.
DR SUPFAM; SSF51604; SSF51604; 1.
DR SUPFAM; SSF54826; SSF54826; 1.
DR PROSITE; PS00908; MR_MLE_1; 1.
PE 3: Inferred from homology;
KW Magnesium; Metal-binding.
FT CHAIN 1..399
FT /note="D-galactonate dehydratase family member A1Q3065"
FT /id="PRO_0000429919"
FT BINDING 205
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000250"
FT BINDING 207
FT /ligand="D-arabinonate"
FT /ligand_id="ChEBI:CHEBI:16157"
FT /evidence="ECO:0000250"
FT BINDING 231
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000250"
FT BINDING 257
FT /ligand="D-arabinonate"
FT /ligand_id="ChEBI:CHEBI:16157"
FT /evidence="ECO:0000250"
FT BINDING 257
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000250"
FT BINDING 278
FT /ligand="D-arabinonate"
FT /ligand_id="ChEBI:CHEBI:16157"
FT /evidence="ECO:0000250"
FT BINDING 307
FT /ligand="D-arabinonate"
FT /ligand_id="ChEBI:CHEBI:16157"
FT /evidence="ECO:0000250"
FT BINDING 334
FT /ligand="D-arabinonate"
FT /ligand_id="ChEBI:CHEBI:16157"
FT /evidence="ECO:0000250"
SQ SEQUENCE 399 AA; 45420 MW; CCB5C686926427F1 CRC64;
MNKNTISNIE CVITKPDRHN LITVIVETES GVTGYGCATF QQRPLAVKTM VDEYLKPLLI
GKDANNIEDL WQMMMVNAYW RNGPVINNAI SGVDMALWDI KAKLANMPLH QLFGGKSRDA
IQVYTHATSD TMEGLYEQVD KYLEQGYQHI RCQLGFYGGV PENIQTAQNP TQGSYYDQDQ
YIENTVEMFK NLREKYGKQF HILHDVHERL FPNQAIQFAK QVEQYNPFFI EDILPPSQTE
WLDNIRNQSS VSLALGELFN NPEEWKALII NRRVDFIRCH VSQIGGITPA LKLGHFCESF
GVRIAWHCPP DMTPIGAAVN THLNVHLHNA AIQEHVEYKA NTQRVFPNAA EPINGYLYAS
EIAGIGVEMD CEAAQDFPVE YRPHEWTQSR LPDGSIHTP