IMP4_RAT
ID IMP4_RAT Reviewed; 291 AA.
AC Q5PQR5;
DT 16-AUG-2005, integrated into UniProtKB/Swiss-Prot.
DT 04-JAN-2005, sequence version 1.
DT 03-AUG-2022, entry version 100.
DE RecName: Full=U3 small nucleolar ribonucleoprotein protein IMP4;
DE Short=U3 snoRNP protein IMP4;
GN Name=Imp4;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Testis;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- FUNCTION: Component of the 60-80S U3 small nucleolar ribonucleoprotein
CC (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal
CC RNA processing (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Component of a heterotrimeric complex containing IMP3, IMP4
CC and MPHOSPH10. Interacts with MPHOSPH10 (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000250}.
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DR EMBL; BC087066; AAH87066.1; -; mRNA.
DR RefSeq; NP_001009700.1; NM_001009700.1.
DR AlphaFoldDB; Q5PQR5; -.
DR SMR; Q5PQR5; -.
DR STRING; 10116.ENSRNOP00000062237; -.
DR iPTMnet; Q5PQR5; -.
DR PhosphoSitePlus; Q5PQR5; -.
DR PaxDb; Q5PQR5; -.
DR Ensembl; ENSRNOT00000066913; ENSRNOP00000062237; ENSRNOG00000013285.
DR GeneID; 316317; -.
DR KEGG; rno:316317; -.
DR UCSC; RGD:1308463; rat.
DR CTD; 92856; -.
DR RGD; 1308463; Imp4.
DR eggNOG; KOG2781; Eukaryota.
DR GeneTree; ENSGT00940000153231; -.
DR HOGENOM; CLU_040063_2_0_1; -.
DR InParanoid; Q5PQR5; -.
DR OMA; IGTMSEQ; -.
DR OrthoDB; 768872at2759; -.
DR PhylomeDB; Q5PQR5; -.
DR Reactome; R-RNO-6791226; Major pathway of rRNA processing in the nucleolus and cytosol.
DR PRO; PR:Q5PQR5; -.
DR Proteomes; UP000002494; Chromosome 9.
DR Bgee; ENSRNOG00000013285; Expressed in heart and 20 other tissues.
DR Genevisible; Q5PQR5; RN.
DR GO; GO:0034457; C:Mpp10 complex; ISO:RGD.
DR GO; GO:0005730; C:nucleolus; IBA:GO_Central.
DR GO; GO:0030684; C:preribosome; ISO:RGD.
DR GO; GO:0032040; C:small-subunit processome; IBA:GO_Central.
DR GO; GO:0042134; F:rRNA primary transcript binding; IEA:InterPro.
DR GO; GO:0030515; F:snoRNA binding; IBA:GO_Central.
DR GO; GO:0006364; P:rRNA processing; IBA:GO_Central.
DR InterPro; IPR007109; Brix.
DR InterPro; IPR044281; IMP4/RPF1.
DR PANTHER; PTHR22734; PTHR22734; 1.
DR Pfam; PF04427; Brix; 1.
DR SMART; SM00879; Brix; 1.
DR PROSITE; PS50833; BRIX; 1.
PE 2: Evidence at transcript level;
KW Nucleus; Reference proteome; Ribonucleoprotein; Ribosome biogenesis;
KW rRNA processing.
FT CHAIN 1..291
FT /note="U3 small nucleolar ribonucleoprotein protein IMP4"
FT /id="PRO_0000120239"
FT DOMAIN 83..264
FT /note="Brix"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00034"
SQ SEQUENCE 291 AA; 33656 MW; 5AFF74AA16E0C7BC CRC64;
MLRREARLRR EYLYRKAREE AQRSVQEKKE RVKRALEENQ LIPTELRREA LALQGSLEFD
DAGGEGVTSH VDDEYRWAGV EDPKVMITTS RDPSSRLKMF AKELKLVFPG AQRMNRGRHE
VGALVRACKA NGVTDLLVVH EHRGTPVGLI VSHLPFGPTA YFTLCNVVMR HDIPDLGTMS
EAKPHLITHG FSSRLGKRVS DILRYLFPVP KDDSHRVITF ANQDDYISFR HHVYKKTDHR
NVELTEVGPR FELKLYMIRL GTLEQEATAD VEWRWHPYTN TARKRVFLSA E