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INAVA_MOUSE
ID   INAVA_MOUSE             Reviewed;         663 AA.
AC   Q7TN12; Q7TN27; Q8BGK3;
DT   03-OCT-2006, integrated into UniProtKB/Swiss-Prot.
DT   01-OCT-2003, sequence version 1.
DT   03-AUG-2022, entry version 99.
DE   RecName: Full=Innate immunity activator protein {ECO:0000250|UniProtKB:Q3KP66};
GN   Name=Inava {ECO:0000250|UniProtKB:Q3KP66};
OS   Mus musculus (Mouse).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC   Murinae; Mus; Mus.
OX   NCBI_TaxID=10090;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=C57BL/6J;
RX   PubMed=15489334; DOI=10.1101/gr.2596504;
RG   The MGC Project Team;
RT   "The status, quality, and expansion of the NIH full-length cDNA project:
RT   the Mammalian Gene Collection (MGC).";
RL   Genome Res. 14:2121-2127(2004).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 564-663.
RC   STRAIN=C57BL/6J; TISSUE=Testis;
RX   PubMed=16141072; DOI=10.1126/science.1112014;
RA   Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N.,
RA   Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K.,
RA   Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.,
RA   Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R.,
RA   Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T.,
RA   Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A.,
RA   Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B.,
RA   Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M.,
RA   Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S.,
RA   Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E.,
RA   Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D.,
RA   Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M.,
RA   Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H.,
RA   Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V.,
RA   Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S.,
RA   Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H.,
RA   Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N.,
RA   Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F.,
RA   Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G.,
RA   Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z.,
RA   Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C.,
RA   Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y.,
RA   Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S.,
RA   Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K.,
RA   Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R.,
RA   van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H.,
RA   Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M.,
RA   Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C.,
RA   Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S.,
RA   Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K.,
RA   Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M.,
RA   Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C.,
RA   Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A.,
RA   Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.;
RT   "The transcriptional landscape of the mammalian genome.";
RL   Science 309:1559-1563(2005).
RN   [3]
RP   FUNCTION, AND DISRUPTION PHENOTYPE.
RX   PubMed=29420262; DOI=10.1126/science.aan0814;
RA   Mohanan V., Nakata T., Desch A.N., Levesque C., Boroughs A., Guzman G.,
RA   Cao Z., Creasey E., Yao J., Boucher G., Charron G., Bhan A.K., Schenone M.,
RA   Carr S.A., Reinecker H.C., Daly M.J., Rioux J.D., Lassen K.G., Xavier R.J.;
RT   "C1orf106 is a colitis risk gene that regulates stability of epithelial
RT   adherens junctions.";
RL   Science 359:1161-1166(2018).
CC   -!- FUNCTION: Expressed in peripheral macrophages and intestinal myeloid-
CC       derived cells, is required for optimal PRR (pattern recognition
CC       receptor)-induced signaling, cytokine secretion, and bacterial
CC       clearance. Upon stimulation of a broad range of PRRs (pattern
CC       recognition receptor) such as NOD2 or TLR2, TLR3, TLR4, TLR5, TLR7 and
CC       TLR9, associates with YWHAQ/14-3-3T, which in turn leads to the
CC       recruitment and activation of MAP kinases and NF-kappa-B signaling
CC       complexes that amplifies PRR-induced downstream signals and cytokine
CC       secretion (By similarity). In the intestine, regulates adherens
CC       junction stability by regulating the degradation of CYTH1 and CYTH2,
CC       probably acting as substrate cofactor for SCF E3 ubiquitin-protein
CC       ligase complexes. Stabilizes adherens junctions by limiting CYTH1-
CC       dependent ARF6 activation (PubMed:29420262).
CC       {ECO:0000250|UniProtKB:Q3KP66, ECO:0000269|PubMed:29420262}.
CC   -!- SUBUNIT: Interacts with IRAK1, NOD2 and RIPK2; the interaction takes
CC       place upon PRR stimulation. Interacts with YWHAQ/14-3-3T; the
CC       interaction increases upon PRR stimulation and is required for cellular
CC       signaling pathway activation and cytokine secretion. Interacts (via N-
CC       terminal domain) with CYTH1 and CYTH2 (via their N-terminal domains).
CC       Interacts with FBXW11 and BTRC; associates with SCF E3 ubiquitin-
CC       protein ligase complexes (By similarity).
CC       {ECO:0000250|UniProtKB:Q3KP66}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:Q3KP66}. Cytoplasm
CC       {ECO:0000250|UniProtKB:Q3KP66}. Note=Translocates to the nucleus upon
CC       NOD2 stimulation. {ECO:0000250|UniProtKB:Q3KP66}.
CC   -!- DISRUPTION PHENOTYPE: After infection with Citrobacter rodentium,
CC       mutants show significantly increased bacterial loads at day 5 compared
CC       to wild-types. They are able to control the infection by day 12 post-
CC       infection, they exhibit significantly shortened colon length. They
CC       don't have impaired cytokine response (PubMed:29420262). Mutants also
CC       exhibit impaired recovery from dextran sodium sulfate-induces colitis,
CC       they show increased body weight loss and reduced colon length
CC       (PubMed:29420262). {ECO:0000269|PubMed:29420262}.
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DR   EMBL; BC052416; AAH52416.2; -; mRNA.
DR   EMBL; BC053100; AAH53100.1; -; mRNA.
DR   EMBL; AK006603; BAC25149.1; -; mRNA.
DR   EMBL; AK018917; BAC25571.1; -; mRNA.
DR   RefSeq; NP_083148.3; NM_028872.3.
DR   AlphaFoldDB; Q7TN12; -.
DR   SMR; Q7TN12; -.
DR   STRING; 10090.ENSMUSP00000113785; -.
DR   iPTMnet; Q7TN12; -.
DR   PhosphoSitePlus; Q7TN12; -.
DR   MaxQB; Q7TN12; -.
DR   PaxDb; Q7TN12; -.
DR   PRIDE; Q7TN12; -.
DR   ProteomicsDB; 266989; -.
DR   DNASU; 67313; -.
DR   GeneID; 67313; -.
DR   KEGG; mmu:67313; -.
DR   CTD; 55765; -.
DR   MGI; MGI:1921579; Inava.
DR   eggNOG; KOG3529; Eukaryota.
DR   InParanoid; Q7TN12; -.
DR   OrthoDB; 509744at2759; -.
DR   PhylomeDB; Q7TN12; -.
DR   BioGRID-ORCS; 67313; 1 hit in 71 CRISPR screens.
DR   ChiTaRS; Inava; mouse.
DR   PRO; PR:Q7TN12; -.
DR   Proteomes; UP000000589; Unplaced.
DR   RNAct; Q7TN12; protein.
DR   GO; GO:0005737; C:cytoplasm; ISS:UniProtKB.
DR   GO; GO:0016604; C:nuclear body; ISO:MGI.
DR   GO; GO:0005654; C:nucleoplasm; ISO:MGI.
DR   GO; GO:0005634; C:nucleus; ISS:UniProtKB.
DR   GO; GO:0034334; P:adherens junction maintenance; IDA:UniProtKB.
DR   GO; GO:0045087; P:innate immune response; ISS:UniProtKB.
DR   GO; GO:0060729; P:intestinal epithelial structure maintenance; IMP:UniProtKB.
DR   GO; GO:0070431; P:nucleotide-binding oligomerization domain containing 2 signaling pathway; ISS:UniProtKB.
DR   GO; GO:0002221; P:pattern recognition receptor signaling pathway; ISS:UniProtKB.
DR   GO; GO:0002720; P:positive regulation of cytokine production involved in immune response; ISS:UniProtKB.
DR   GO; GO:0043123; P:positive regulation of I-kappaB kinase/NF-kappaB signaling; ISS:UniProtKB.
DR   GO; GO:0032731; P:positive regulation of interleukin-1 beta production; ISS:UniProtKB.
DR   GO; GO:0032733; P:positive regulation of interleukin-10 production; ISS:UniProtKB.
DR   GO; GO:0032755; P:positive regulation of interleukin-6 production; ISS:UniProtKB.
DR   GO; GO:0043410; P:positive regulation of MAPK cascade; ISS:UniProtKB.
DR   GO; GO:0031398; P:positive regulation of protein ubiquitination; IMP:UniProtKB.
DR   GO; GO:0032874; P:positive regulation of stress-activated MAPK cascade; ISS:UniProtKB.
DR   GO; GO:1903409; P:reactive oxygen species biosynthetic process; ISS:UniProtKB.
DR   GO; GO:0032495; P:response to muramyl dipeptide; ISS:UniProtKB.
DR   GO; GO:0032494; P:response to peptidoglycan; ISS:UniProtKB.
DR   InterPro; IPR043447; CCDC120/INAVA.
DR   InterPro; IPR021774; DUF3338.
DR   InterPro; IPR039106; INAVA.
DR   PANTHER; PTHR16093; PTHR16093; 1.
DR   PANTHER; PTHR16093:SF4; PTHR16093:SF4; 1.
DR   Pfam; PF11819; CUPID; 1.
PE   2: Evidence at transcript level;
KW   Coiled coil; Cytoplasm; Immunity; Innate immunity; Nucleus;
KW   Reference proteome.
FT   CHAIN           1..663
FT                   /note="Innate immunity activator protein"
FT                   /id="PRO_0000251730"
FT   REGION          1..73
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          219..363
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          375..405
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          448..483
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          117..147
FT                   /evidence="ECO:0000255"
FT   MOTIF           164..170
FT                   /note="Nuclear localization signal (NLS) 1"
FT                   /evidence="ECO:0000250|UniProtKB:Q3KP66"
FT   MOTIF           332..338
FT                   /note="Nuclear localization signal (NLS) 2"
FT                   /evidence="ECO:0000250|UniProtKB:Q3KP66"
FT   MOTIF           422..428
FT                   /note="Nuclear localization signal (NLS) 3"
FT                   /evidence="ECO:0000250|UniProtKB:Q3KP66"
FT   COMPBIAS        219..244
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        248..268
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        283..299
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        342..363
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        380..405
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        455..476
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   CONFLICT        564
FT                   /note="R -> G (in Ref. 2; BAC25149/BAC25571)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   663 AA;  72693 MW;  3B1BEB1A8D6298E1 CRC64;
     MLQMPKLNEI PPGRGGPGEP WGEGRWAGPT GPEAARPARG ARGQARGARA RWDSWEHSRL
     PTHPGPGWDQ CSPSFLCAPS SQKLIMESKD EVSDSDSGII LQSGPDSPVS PMKELTNAVR
     KQQRALEARL EACLEELRRL CLREAELTGT LPAEYPLKPG EKAPKVRRRI GAAYKLDEWA
     LHREDPLSSL ERQLALQLQI TEAARRLCAE ENLSRQARRQ RKHAALQEEK KLRDLQRCLG
     DRRRNSEPPP TTVPSLGREL SASDDSSLSD GLLLEEEDSQ APKPPPESPA PPSRPLPPQS
     LEGLQPTGPE SGGQERAPIQ NSPWKETSLD HPYEKPRKSS ELSSESSSPA TTPQDQPNPS
     SLWVLDAASY HVVPIRNVPG QRQGRTSAPA TPEMQGRRGQ SQSLRVDSFR AGAEGRGRSA
     FPRRRPTHYT VTVPDSCFTP GKPPLPHPAC HSCSEDSGSD VSSISHPTSP GSSSPDISFL
     RPLCLPEPPR HRGAWGPACG RELAPHYSKL LLPAGYFPTG RYVMVAEGHL PPGEWELCRA
     AVGAAYDEEG APLRYQRLVP SHSRIVRTPS LKDSPAGRGL SKAAVSEELK WWHERARLRS
     SRPHSLDRQG AFRVRSLPPG RESFGRASGP RTQVPPVYVL RRSTDGAPVQ VFVPENGEII
     SQV
 
 
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