INT12_XENLA
ID INT12_XENLA Reviewed; 464 AA.
AC Q6DJM6;
DT 31-OCT-2006, integrated into UniProtKB/Swiss-Prot.
DT 16-AUG-2004, sequence version 1.
DT 03-AUG-2022, entry version 75.
DE RecName: Full=Integrator complex subunit 12;
DE Short=Int12;
GN Name=ints12;
OS Xenopus laevis (African clawed frog).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus.
OX NCBI_TaxID=8355;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Kidney;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Component of the Integrator complex, a complex involved in
CC the small nuclear RNAs (snRNA) U1 and U2 transcription and in their 3'-
CC box-dependent processing. {ECO:0000250}.
CC -!- SUBUNIT: Belongs to the multiprotein complex Integrator.
CC {ECO:0000250|UniProtKB:Q96CB8}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:Q96CB8}.
CC -!- SIMILARITY: Belongs to the Integrator subunit 12 family. {ECO:0000305}.
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DR EMBL; BC075149; AAH75149.1; -; mRNA.
DR RefSeq; NP_001086353.1; NM_001092884.1.
DR RefSeq; XP_018092689.1; XM_018237200.1.
DR RefSeq; XP_018092694.1; XM_018237205.1.
DR AlphaFoldDB; Q6DJM6; -.
DR SMR; Q6DJM6; -.
DR DNASU; 444782; -.
DR GeneID; 444782; -.
DR KEGG; xla:444782; -.
DR CTD; 444782; -.
DR Xenbase; XB-GENE-977208; ints12.S.
DR OMA; AKQDKRN; -.
DR OrthoDB; 1631937at2759; -.
DR Proteomes; UP000186698; Chromosome 1S.
DR Bgee; 444782; Expressed in testis and 19 other tissues.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0016180; P:snRNA processing; IEA:InterPro.
DR CDD; cd15501; PHD_Int12; 1.
DR Gene3D; 3.30.40.10; -; 1.
DR InterPro; IPR039053; Int12.
DR InterPro; IPR039054; Int12_PHD.
DR InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR13415:SF4; PTHR13415:SF4; 1.
DR Pfam; PF00628; PHD; 1.
DR SMART; SM00249; PHD; 1.
DR SUPFAM; SSF57903; SSF57903; 1.
DR PROSITE; PS01359; ZF_PHD_1; 1.
DR PROSITE; PS50016; ZF_PHD_2; 1.
PE 2: Evidence at transcript level;
KW Metal-binding; Nucleus; Reference proteome; Zinc; Zinc-finger.
FT CHAIN 1..464
FT /note="Integrator complex subunit 12"
FT /id="PRO_0000259571"
FT ZN_FING 156..212
FT /note="PHD-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00146"
FT REGION 42..98
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 216..252
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 312..445
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 66..83
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 216..231
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 312..356
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 370..445
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 464 AA; 48913 MW; A47390D63B41DD6E CRC64;
MAVTINTELD PVFLKALGYL HSKSKDSAEK LKALLDESLC KGNDSVYRPQ PKEVEQPKAM
LSKVKPETKA SSSTPSSSIL SKPLASEKVK KEAEKRTADK MKVEINDIMD IPKKPRIEKT
EARSSPVTVQ LSKDLPVPDL SSFEETSADD FAMEMGLACV VCRQMTVFSG NQLVECQECH
NLYHQDCHRP QVTDKDVNDP RLVWYCARCT RQMKRMAQKN QKPSQKPAPS AVSAVTPVAK
DPSVNKPELK SKSDSANTFL AFKRAEVKAS SAVSSNPSNS GVSSSSASGL TGWAAFGAKT
ASAVPVSGKL GTNSQATSGK PPSLSSVQKA GTVPGLTPSK AGSVSKSGSG GSSSTIPLKP
LPPLILGKTG LSRSMSSDNV SKTGLPSPNP SSSGSVSSLS SQLGSNNGSS NTAGSNVNSS
NKVAVDPSMQ QSGAKGPTSQ ESQLNAMKRL QMVKKKAAQK KLKK