INT12_XENTR
ID INT12_XENTR Reviewed; 466 AA.
AC Q0V9U1;
DT 31-OCT-2006, integrated into UniProtKB/Swiss-Prot.
DT 05-SEP-2006, sequence version 1.
DT 03-AUG-2022, entry version 73.
DE RecName: Full=Integrator complex subunit 12;
DE Short=Int12;
GN Name=ints12;
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Brain;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Component of the Integrator complex, a complex involved in
CC the small nuclear RNAs (snRNA) U1 and U2 transcription and in their 3'-
CC box-dependent processing. {ECO:0000250}.
CC -!- SUBUNIT: Belongs to the multiprotein complex Integrator.
CC {ECO:0000250|UniProtKB:Q96CB8}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:Q96CB8}.
CC -!- SIMILARITY: Belongs to the Integrator subunit 12 family. {ECO:0000305}.
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DR EMBL; BC121396; AAI21397.1; -; mRNA.
DR RefSeq; NP_001072325.1; NM_001078857.1.
DR AlphaFoldDB; Q0V9U1; -.
DR SMR; Q0V9U1; -.
DR STRING; 8364.ENSXETP00000030789; -.
DR PaxDb; Q0V9U1; -.
DR GeneID; 779778; -.
DR KEGG; xtr:779778; -.
DR CTD; 57117; -.
DR Xenbase; XB-GENE-977203; ints12.
DR eggNOG; KOG4323; Eukaryota.
DR InParanoid; Q0V9U1; -.
DR OrthoDB; 1631937at2759; -.
DR Reactome; R-XTR-6807505; RNA polymerase II transcribes snRNA genes.
DR Proteomes; UP000008143; Chromosome 1.
DR Proteomes; UP000790000; Unplaced.
DR GO; GO:0032039; C:integrator complex; IBA:GO_Central.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0034472; P:snRNA 3'-end processing; IBA:GO_Central.
DR CDD; cd15501; PHD_Int12; 1.
DR Gene3D; 3.30.40.10; -; 1.
DR InterPro; IPR039053; Int12.
DR InterPro; IPR039054; Int12_PHD.
DR InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR13415:SF4; PTHR13415:SF4; 1.
DR Pfam; PF00628; PHD; 1.
DR SMART; SM00249; PHD; 1.
DR SUPFAM; SSF57903; SSF57903; 1.
DR PROSITE; PS01359; ZF_PHD_1; 1.
DR PROSITE; PS50016; ZF_PHD_2; 1.
PE 2: Evidence at transcript level;
KW Metal-binding; Nucleus; Reference proteome; Zinc; Zinc-finger.
FT CHAIN 1..466
FT /note="Integrator complex subunit 12"
FT /id="PRO_0000259572"
FT ZN_FING 156..212
FT /note="PHD-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00146"
FT REGION 41..101
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 216..251
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 311..466
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 66..84
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 85..101
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 216..232
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 311..332
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 342..360
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 372..449
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 466 AA; 48950 MW; 155A0F7A327EF875 CRC64;
MAVTINTELD PVFLKALGYL HSKSKDSAEK LKALLDESLC KGNDSVYRPQ PKEMEQPKAM
LSKVKPETKA SSSTPSSSML SKPLTSEKLK KEAEKRSADK MKVEISDVMD IPKKPRIEKT
EARSSPVTVQ LSKDLPVPDL SSFDETSADD FAMEMGLACV VCRQMTVFSG NQLVECQECH
NLYHQDCHKP QVTDKDVNDP RLVWYCARCT RQMKRMAQKN QKPSQKPSPS AVSAVTPVAK
DPSVNKPELK AKPDSANTFL AFKRAEVKAS SAVSSSSSNS GVSSSSASGL TGWAAFGAKT
ANAVPVLGKL GTSSQATSGK PPSLSSVQKT GAAPGLAPSK PGSVSKSGSG GSSSSSTIPI
KPLPPLILGK TGLSRSMSSD NVSKTGLPSP NPSSAGSVSS LSSQLGSNNG SSSAAGSNVT
SSNKVAVDPS MQLSGAKGPT SQESQLNAMK RLQMVKKKAA QKKLKK