INT2_CHICK
ID INT2_CHICK Reviewed; 1192 AA.
AC Q5ZKU4;
DT 16-MAY-2006, integrated into UniProtKB/Swiss-Prot.
DT 23-NOV-2004, sequence version 1.
DT 03-AUG-2022, entry version 80.
DE RecName: Full=Integrator complex subunit 2;
DE Short=Int2;
GN Name=INTS2; ORFNames=RCJMB04_9c3;
OS Gallus gallus (Chicken).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae;
OC Phasianinae; Gallus.
OX NCBI_TaxID=9031;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=CB; TISSUE=Bursa of Fabricius;
RX PubMed=15642098; DOI=10.1186/gb-2004-6-1-r6;
RA Caldwell R.B., Kierzek A.M., Arakawa H., Bezzubov Y., Zaim J., Fiedler P.,
RA Kutter S., Blagodatski A., Kostovska D., Koter M., Plachy J., Carninci P.,
RA Hayashizaki Y., Buerstedde J.-M.;
RT "Full-length cDNAs from chicken bursal lymphocytes to facilitate gene
RT function analysis.";
RL Genome Biol. 6:R6.1-R6.9(2005).
CC -!- FUNCTION: Component of the Integrator complex, a complex involved in
CC the small nuclear RNAs (snRNA) U1 and U2 transcription and in their 3'-
CC box-dependent processing. {ECO:0000250}.
CC -!- SUBUNIT: Belongs to the multiprotein complex Integrator.
CC {ECO:0000250|UniProtKB:Q9H0H0}.
CC -!- SUBCELLULAR LOCATION: Nucleus membrane {ECO:0000250|UniProtKB:Q9H0H0};
CC Single-pass membrane protein {ECO:0000250|UniProtKB:Q9H0H0}.
CC -!- SIMILARITY: Belongs to the Integrator subunit 2 family. {ECO:0000305}.
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DR EMBL; AJ719990; CAG31649.1; -; mRNA.
DR RefSeq; NP_001025893.1; NM_001030722.1.
DR AlphaFoldDB; Q5ZKU4; -.
DR SMR; Q5ZKU4; -.
DR STRING; 9031.ENSGALP00000008442; -.
DR PaxDb; Q5ZKU4; -.
DR GeneID; 417640; -.
DR KEGG; gga:417640; -.
DR CTD; 57508; -.
DR VEuPathDB; HostDB:geneid_417640; -.
DR eggNOG; ENOG502QSP2; Eukaryota.
DR InParanoid; Q5ZKU4; -.
DR OrthoDB; 173270at2759; -.
DR PhylomeDB; Q5ZKU4; -.
DR PRO; PR:Q5ZKU4; -.
DR Proteomes; UP000000539; Unplaced.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0032039; C:integrator complex; IBA:GO_Central.
DR GO; GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0034472; P:snRNA 3'-end processing; IBA:GO_Central.
DR InterPro; IPR026236; Int2_metazoa.
DR InterPro; IPR029321; INTS2.
DR PANTHER; PTHR28608; PTHR28608; 1.
DR Pfam; PF14750; INTS2; 1.
DR PRINTS; PR02105; INTSUBUNIT2.
PE 2: Evidence at transcript level;
KW Membrane; Nucleus; Reference proteome; Transmembrane; Transmembrane helix.
FT CHAIN 1..1192
FT /note="Integrator complex subunit 2"
FT /id="PRO_0000236101"
FT TRANSMEM 420..436
FT /note="Helical"
FT /evidence="ECO:0000255"
SQ SEQUENCE 1192 AA; 132884 MW; D6C6EB45D013D5DB CRC64;
MAECSGLQFV SPYAFEAMQK VDVVRLAALS DPELRLLLPC LVRMALCAPA DQSQSWAQDK
KLILRLLSGV EAVNSIVALL SVDFHALEQD ASKEQQLRHK LGGGSGESIL VSQLQHGLTL
EFEHSDSPRR LRLVLSELLA IMNKVSESNG EFFLKSSELF ESPVYLEEAA DVLCILQAEL
PSLLPIVDVA EALLHVKNGA WFLCLLVANV PDSFNEVCRG LIKNGERQDE ESVGGRRRTE
ALRHLCKMNP SQALRVRGMV VEECHLPGLG VALTLDHTKN ESSDDGVSDL VCFVSGLLLG
TNAKVRTWFG TFIRNGQQRK RDNISSVLWQ MRRQLLLELM GILPTVRSTH IVEEADVDTE
PNVSVYSGLK EEHVVKASAL LRLYCALMGI AGLKPTDEEA EQLLQLMTSR PPATPAGVRF
VSLSFCMLLA FSTLVSTPEQ EQLMVMWLSW MIKEEAYFES ISGVSASFGE MLLLVAMYFH
SNQLSAIIDL VCSTLGMKIV IKPSSLSRMK TIFTQEIFTE QVVTAHAVRV PVTGSLSANI
TGFLPIHCIY QLLRSRSFTK HKVSIKDWIY RQLCETTTPL HPQLLPLIDV YINSILTPAS
KSNPEATNQP VTEQEILNVF QGLTGGENTR PAQRYSITTQ LLVLYYVLSY EEALLANTKI
LAAMQRKPKS YSSALMDQIP IKYLIRQAQG LQQELGGLHS ALLRLLATNY PHLCIVEDWI
CEEQITGTDA LLRRMLLTTI AKNHSPKQLQ EAFSMLPGNH TQLMQILEHL TLLSAGELIP
YAEVLTSNMN CLLNAGVPRR ILQTVNKLWM VLNTVMPRRL WVMTVNALQP SVKIVRQQKY
TQNDLMIDPL IVLRCDQRVH RSPPLMDITL HMLNGYLLAS KAYLNAHLKE TAEQDIRPSQ
NNAMGPETPE VTREELKNAL LAAQDSAAVQ ILLEICLPTE EEKAQSSSTY SLLKSVQSTT
SPKSSDVEEE EDSLLCNLRE VQCLICCLLH QMYIADPNIV KLVHFQGYPC ELLALTVAGI
PSMHICLDFI PELIAQPELE KQIFAIQLLS FLCIQYALPK SLSVARLAIN VMGTLLTVLT
QSKRYAFFMP TLPCLVSFCQ AFPPLYEDIM SLLIQIGQVC ASDVATQTRD FDPIITRLQQ
LKERPNEVSG LCKDSPYKSC SRDITSVDPD VQLCQCVEST IIEIINMSVS GV