IPI1_SCHPO
ID IPI1_SCHPO Reviewed; 413 AA.
AC O94718;
DT 23-OCT-2007, integrated into UniProtKB/Swiss-Prot.
DT 22-SEP-2009, sequence version 2.
DT 25-MAY-2022, entry version 100.
DE RecName: Full=Pre-rRNA-processing protein ipi1;
GN Name=ipi1; ORFNames=SPCC1393.06c;
OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
OC Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae;
OC Schizosaccharomyces.
OX NCBI_TaxID=284812;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=972 / ATCC 24843;
RX PubMed=11859360; DOI=10.1038/nature724;
RA Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A.,
RA Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S.,
RA Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.,
RA Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S.,
RA Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S.,
RA Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D.,
RA Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P.,
RA Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K.,
RA O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M.,
RA Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N.,
RA Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A.,
RA Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R.,
RA Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M.,
RA Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A.,
RA Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A.,
RA Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H.,
RA Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S.,
RA Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C.,
RA Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A.,
RA Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M.,
RA del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S.,
RA Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R.,
RA Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G.,
RA Nurse P.;
RT "The genome sequence of Schizosaccharomyces pombe.";
RL Nature 415:871-880(2002).
CC -!- FUNCTION: Component of the RIX1 complex required for processing of ITS2
CC sequences from 35S pre-rRNA. {ECO:0000250|UniProtKB:P38803}.
CC -!- SUBUNIT: Component of the RIX1 complex, composed of ipi1, rix1/ipi2 and
CC crb3/ipi3 in a 1:2:2 stoichiometry. The complex interacts (via rix1)
CC with mdn1 (via its hexameric AAA ATPase ring) and the pre-60S ribosome
CC particles. {ECO:0000250|UniProtKB:P38803}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:P38803}.
CC -!- SIMILARITY: Belongs to the IPI1/TEX10 family. {ECO:0000305}.
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DR EMBL; CU329672; CAB38162.2; -; Genomic_DNA.
DR PIR; T40954; T40954.
DR RefSeq; NP_587964.2; NM_001022955.3.
DR AlphaFoldDB; O94718; -.
DR SMR; O94718; -.
DR BioGRID; 275817; 2.
DR STRING; 4896.SPCC1393.06c.1; -.
DR MaxQB; O94718; -.
DR PaxDb; O94718; -.
DR EnsemblFungi; SPCC1393.06c.1; SPCC1393.06c.1:pep; SPCC1393.06c.
DR GeneID; 2539247; -.
DR KEGG; spo:SPCC1393.06c; -.
DR PomBase; SPCC1393.06c; ipi1.
DR VEuPathDB; FungiDB:SPCC1393.06c; -.
DR eggNOG; KOG2149; Eukaryota.
DR HOGENOM; CLU_674656_0_0_1; -.
DR InParanoid; O94718; -.
DR OMA; HSGMTHI; -.
DR PhylomeDB; O94718; -.
DR Reactome; R-SPO-6791226; Major pathway of rRNA processing in the nucleolus and cytosol.
DR PRO; PR:O94718; -.
DR Proteomes; UP000002485; Chromosome III.
DR GO; GO:0000792; C:heterochromatin; IDA:PomBase.
DR GO; GO:0005634; C:nucleus; HDA:PomBase.
DR GO; GO:0097344; C:Rix1 complex; IDA:PomBase.
DR GO; GO:0006364; P:rRNA processing; IMP:PomBase.
DR Gene3D; 1.25.10.10; -; 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR024679; Ipi1_N.
DR InterPro; IPR037947; TEX10/Ipi1.
DR PANTHER; PTHR16056:SF2; PTHR16056:SF2; 1.
DR Pfam; PF12333; Ipi1_N; 1.
DR SUPFAM; SSF48371; SSF48371; 1.
PE 3: Inferred from homology;
KW Nucleus; Reference proteome; Ribosome biogenesis; rRNA processing.
FT CHAIN 1..413
FT /note="Pre-rRNA-processing protein ipi1"
FT /id="PRO_0000308729"
SQ SEQUENCE 413 AA; 46919 MW; 5C827C8216AB04F5 CRC64;
MGKSKKAKAK RADFNKQKLK VGKSKNAPNN FTDTSFRTKT LVLPTQAALE KEDFNTTAKD
QAYFAHLLGM LKHHNANQRQ ETLEKLTQYV LSHTSILTTS TALLLKLTSP LILDESSSVR
DCLYRFLEKF IYIMGPELLE PNIGMIFLYT HSGMTHITPS IRNDSTKFLS LLINACKDRL
SSSAISLQWK KTLECFTNLL GWNSESASVK RTTSFSKKSS ANMIRHLTVC NDFLQLGLNP
KLQAKNQQSS VHLKYPYLQQ CIVIHPKYEA FRSPCSFAYL SLFNPNKHDL VDNPTFRWQT
IYPLIPGIIE FIRNSWSDAC PVVKDGSNSP SASKVCRTVL SMLGLFTEQV FSVADEPNNH
RKKISQVLRK INRDIELINI NYGTDSEWRG VLKGYDKLRE RAVELDALEN PGK