IPI1_SCLS1
ID IPI1_SCLS1 Reviewed; 348 AA.
AC A7EI93;
DT 23-OCT-2007, integrated into UniProtKB/Swiss-Prot.
DT 11-SEP-2007, sequence version 1.
DT 25-MAY-2022, entry version 61.
DE RecName: Full=Pre-rRNA-processing protein ipi1;
GN Name=ipi1; ORFNames=SS1G_05035;
OS Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (White mold)
OS (Whetzelinia sclerotiorum).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes;
OC Helotiales; Sclerotiniaceae; Sclerotinia.
OX NCBI_TaxID=665079;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 18683 / 1980 / Ss-1;
RX PubMed=21876677; DOI=10.1371/journal.pgen.1002230;
RA Amselem J., Cuomo C.A., van Kan J.A.L., Viaud M., Benito E.P., Couloux A.,
RA Coutinho P.M., de Vries R.P., Dyer P.S., Fillinger S., Fournier E.,
RA Gout L., Hahn M., Kohn L., Lapalu N., Plummer K.M., Pradier J.-M.,
RA Quevillon E., Sharon A., Simon A., ten Have A., Tudzynski B., Tudzynski P.,
RA Wincker P., Andrew M., Anthouard V., Beever R.E., Beffa R., Benoit I.,
RA Bouzid O., Brault B., Chen Z., Choquer M., Collemare J., Cotton P.,
RA Danchin E.G., Da Silva C., Gautier A., Giraud C., Giraud T., Gonzalez C.,
RA Grossetete S., Gueldener U., Henrissat B., Howlett B.J., Kodira C.,
RA Kretschmer M., Lappartient A., Leroch M., Levis C., Mauceli E.,
RA Neuveglise C., Oeser B., Pearson M., Poulain J., Poussereau N.,
RA Quesneville H., Rascle C., Schumacher J., Segurens B., Sexton A., Silva E.,
RA Sirven C., Soanes D.M., Talbot N.J., Templeton M., Yandava C., Yarden O.,
RA Zeng Q., Rollins J.A., Lebrun M.-H., Dickman M.;
RT "Genomic analysis of the necrotrophic fungal pathogens Sclerotinia
RT sclerotiorum and Botrytis cinerea.";
RL PLoS Genet. 7:E1002230-E1002230(2011).
CC -!- FUNCTION: Component of the RIX1 complex required for processing of ITS2
CC sequences from 35S pre-rRNA. {ECO:0000250|UniProtKB:P38803}.
CC -!- SUBUNIT: Component of the RIX1 complex, composed of ipi1, rix1/ipi2 and
CC ipi3 in a 1:2:2 stoichiometry. The complex interacts (via rix1) with
CC mdn1 (via its hexameric AAA ATPase ring) and the pre-60S ribosome
CC particles. {ECO:0000250|UniProtKB:P38803}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:P38803}.
CC -!- SIMILARITY: Belongs to the IPI1/TEX10 family. {ECO:0000305}.
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DR EMBL; CH476626; EDO02559.1; -; Genomic_DNA.
DR RefSeq; XP_001593608.1; XM_001593558.1.
DR AlphaFoldDB; A7EI93; -.
DR SMR; A7EI93; -.
DR STRING; 665079.A7EI93; -.
DR EnsemblFungi; EDO02559; EDO02559; SS1G_05035.
DR GeneID; 5490273; -.
DR KEGG; ssl:SS1G_05035; -.
DR VEuPathDB; FungiDB:sscle_08g063610; -.
DR eggNOG; KOG2149; Eukaryota.
DR HOGENOM; CLU_050252_2_0_1; -.
DR InParanoid; A7EI93; -.
DR OMA; CAGGWVK; -.
DR Proteomes; UP000001312; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0097344; C:Rix1 complex; IBA:GO_Central.
DR GO; GO:0006364; P:rRNA processing; IBA:GO_Central.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR024679; Ipi1_N.
DR InterPro; IPR037947; TEX10/Ipi1.
DR PANTHER; PTHR16056:SF2; PTHR16056:SF2; 1.
DR Pfam; PF12333; Ipi1_N; 1.
DR SUPFAM; SSF48371; SSF48371; 1.
PE 3: Inferred from homology;
KW Nucleus; Reference proteome; Ribosome biogenesis; rRNA processing.
FT CHAIN 1..348
FT /note="Pre-rRNA-processing protein ipi1"
FT /id="PRO_0000308730"
FT REGION 1..22
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 348 AA; 38249 MW; 183681BD8FD0B0BD CRC64;
MGSSARKKKE KKKDFQKTKL RVGKTKAKAD NFTDTSFKSK SIVVNQQSLT TSAPSNVVQF
THYLSLASSS KSDTQRKDAL SFLTTQLSSQ PVNEAIPLPT AVILPKLLPL ILDGNASVRS
QLLKFLRLLP PADIGDRVES ALLYTRAGMT HLATEIRVDA LAVLEWLLQV AGDDVVSCPG
GWVKTLKSFM SMIGWTTSSA TSKWSSASRV SFGISRASFE KSGKTLPRQL LVLSQFLKAG
LVEPDTAAQP TTSDNHFPLF DVERHMIPSR ANAYAHLNLF GSSRDEEGEM YIDREDRQRV
FHKRFQADVV TGVEHAKREA GEAGRAAAVL TKVLRDGMND YSGVDDTQ