APOM_PIG
ID APOM_PIG Reviewed; 188 AA.
AC Q2LE37;
DT 24-JUL-2007, integrated into UniProtKB/Swiss-Prot.
DT 21-FEB-2006, sequence version 1.
DT 03-AUG-2022, entry version 81.
DE RecName: Full=Apolipoprotein M;
DE Short=Apo-M;
DE Short=ApoM;
GN Name=APOM;
OS Sus scrofa (Pig).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus.
OX NCBI_TaxID=9823;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RA Pan G., Xiong Y.Z.;
RT "Isolation, identification of the swine apolipoprotein M gene.";
RL Submitted (NOV-2005) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC TISSUE=Liver;
RA Pan G., Xiong Y.Z.;
RT "The swine apolipoprotein M gene isolated from liver cDNA.";
RL Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RG Porcine genome sequencing project;
RL Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Probably involved in lipid transport. Can bind sphingosine-1-
CC phosphate, myristic acid, palmitic acid and stearic acid, retinol, all-
CC trans-retinoic acid and 9-cis-retinoic acid (By similarity).
CC {ECO:0000250}.
CC -!- SUBUNIT: Interacts with LRP2; LRP2 mediates APOM renal uptake and
CC subsequent lysosomal degradation. {ECO:0000250|UniProtKB:Q9Z1R3}.
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the calycin superfamily. Lipocalin family.
CC Highly divergent. {ECO:0000305}.
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DR EMBL; DQ329240; ABC59064.1; -; mRNA.
DR EMBL; DQ272488; ABB85067.1; -; Genomic_DNA.
DR EMBL; BX548169; CAN59667.1; -; Genomic_DNA.
DR RefSeq; NP_001035730.1; NM_001040640.1.
DR AlphaFoldDB; Q2LE37; -.
DR SMR; Q2LE37; -.
DR STRING; 9823.ENSSSCP00000001505; -.
DR PaxDb; Q2LE37; -.
DR PeptideAtlas; Q2LE37; -.
DR PRIDE; Q2LE37; -.
DR Ensembl; ENSSSCT00000001547; ENSSSCP00000001505; ENSSSCG00000001411.
DR Ensembl; ENSSSCT00005057356; ENSSSCP00005035313; ENSSSCG00005035650.
DR Ensembl; ENSSSCT00015107654; ENSSSCP00015045507; ENSSSCG00015079344.
DR Ensembl; ENSSSCT00015107805; ENSSSCP00015045617; ENSSSCG00015079344.
DR Ensembl; ENSSSCT00025108177; ENSSSCP00025048961; ENSSSCG00025077716.
DR Ensembl; ENSSSCT00030085765; ENSSSCP00030039549; ENSSSCG00030061308.
DR Ensembl; ENSSSCT00035022041; ENSSSCP00035008051; ENSSSCG00035017168.
DR Ensembl; ENSSSCT00040093813; ENSSSCP00040041427; ENSSSCG00040068399.
DR Ensembl; ENSSSCT00045064247; ENSSSCP00045045368; ENSSSCG00045037175.
DR Ensembl; ENSSSCT00050010572; ENSSSCP00050004542; ENSSSCG00050007721.
DR Ensembl; ENSSSCT00055055816; ENSSSCP00055044558; ENSSSCG00055028122.
DR Ensembl; ENSSSCT00060071322; ENSSSCP00060030783; ENSSSCG00060052387.
DR Ensembl; ENSSSCT00065050216; ENSSSCP00065021739; ENSSSCG00065036803.
DR Ensembl; ENSSSCT00070047620; ENSSSCP00070040188; ENSSSCG00070023864.
DR GeneID; 692188; -.
DR KEGG; ssc:692188; -.
DR CTD; 55937; -.
DR VGNC; VGNC:85424; APOM.
DR eggNOG; ENOG502S2IN; Eukaryota.
DR GeneTree; ENSGT00390000001026; -.
DR HOGENOM; CLU_105274_0_0_1; -.
DR InParanoid; Q2LE37; -.
DR OrthoDB; 1302737at2759; -.
DR TreeFam; TF330771; -.
DR Reactome; R-SSC-975634; Retinoid metabolism and transport.
DR Proteomes; UP000008227; Chromosome 7.
DR Proteomes; UP000314985; Chromosome 7.
DR Bgee; ENSSSCG00000001411; Expressed in right lobe of liver and 43 other tissues.
DR ExpressionAtlas; Q2LE37; baseline and differential.
DR Genevisible; Q2LE37; SS.
DR GO; GO:0034364; C:high-density lipoprotein particle; IBA:GO_Central.
DR GO; GO:0034362; C:low-density lipoprotein particle; IBA:GO_Central.
DR GO; GO:0034361; C:very-low-density lipoprotein particle; IBA:GO_Central.
DR GO; GO:0005319; F:lipid transporter activity; IBA:GO_Central.
DR GO; GO:0005543; F:phospholipid binding; IBA:GO_Central.
DR GO; GO:0033344; P:cholesterol efflux; IBA:GO_Central.
DR GO; GO:0034380; P:high-density lipoprotein particle assembly; IBA:GO_Central.
DR GO; GO:0034384; P:high-density lipoprotein particle clearance; IBA:GO_Central.
DR GO; GO:0034375; P:high-density lipoprotein particle remodeling; IBA:GO_Central.
DR Gene3D; 2.40.128.20; -; 1.
DR InterPro; IPR022734; ApoM.
DR InterPro; IPR012674; Calycin.
DR PANTHER; PTHR32028; PTHR32028; 1.
DR Pfam; PF11032; ApoM; 1.
DR SUPFAM; SSF50814; SSF50814; 1.
PE 2: Evidence at transcript level;
KW Disulfide bond; HDL; Lipid transport; Reference proteome; Secreted; Signal;
KW Transport.
FT CHAIN 1..188
FT /note="Apolipoprotein M"
FT /id="PRO_0000296390"
FT SIGNAL 1..?22
FT /note="Not cleaved"
FT /evidence="ECO:0000250"
FT BINDING 136
FT /ligand="tetradecanoate"
FT /ligand_id="ChEBI:CHEBI:30807"
FT /evidence="ECO:0000250|UniProtKB:O95445"
FT BINDING 143
FT /ligand="tetradecanoate"
FT /ligand_id="ChEBI:CHEBI:30807"
FT /evidence="ECO:0000250|UniProtKB:O95445"
FT DISULFID 23..167
FT /evidence="ECO:0000250"
FT DISULFID 95..183
FT /evidence="ECO:0000250"
FT DISULFID 128..157
FT /evidence="ECO:0000250"
SQ SEQUENCE 188 AA; 21241 MW; 82F96E45A02716DA CRC64;
MFHQIWAALL YLYGILLNSI YQCPEHSQLT TGGVDGKEFP EPHLGQWYFI AGAAPTKEEL
ATFDPVDNIV FNMAAGSVPM QLQLRATIRT KNGLCVPRKW IYRLSEGNTD LRTEGRPDMK
TKLFSSTCPG GIMLKETGQG YQRFLLYNRS PHPPEKCVEE FQSLTSCLDF KAFLLTPRNQ
EACELSSN