IQM3_ARATH
ID IQM3_ARATH Reviewed; 456 AA.
AC Q9LFA4; Q8L7V5;
DT 14-OCT-2015, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 25-MAY-2022, entry version 109.
DE RecName: Full=IQ domain-containing protein IQM3 {ECO:0000305};
DE AltName: Full=IQ motif-containing protein 3 {ECO:0000303|Ref.4};
GN Name=IQM3 {ECO:0000303|Ref.4};
GN OrderedLocusNames=At3g52870 {ECO:0000312|Araport:AT3G52870};
GN ORFNames=F8J2_40 {ECO:0000312|EMBL:CAB86891.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP GENE FAMILY, NOMENCLATURE, TISSUE SPECIFICITY, AND INDUCTION.
RX DOI=10.1007/s11738-009-0398-9;
RA Zhou Y., Chen Y., Yamamoto K.T., Duan J., Tian C.;
RT "Sequence and expression analysis of the Arabidopsis IQM family.";
RL Acta Physiol. Plant. 32:191-198(2010).
CC -!- FUNCTION: May be involved in biotic and abiotic stress responses.
CC {ECO:0000250|UniProtKB:O82645}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250|UniProtKB:O82645}. Nucleus
CC {ECO:0000250|UniProtKB:O82645}.
CC -!- TISSUE SPECIFICITY: Expressed in roots, rosette and cauline leaves,
CC flowers and siliques, and at lower levels in stems.
CC {ECO:0000269|Ref.4}.
CC -!- INDUCTION: By cadmium and lead. Down-regulated by salt stress.
CC {ECO:0000269|Ref.4}.
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DR EMBL; AL132969; CAB86891.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE79002.1; -; Genomic_DNA.
DR EMBL; AY125521; AAM78112.1; -; mRNA.
DR EMBL; BT001053; AAN46807.1; -; mRNA.
DR PIR; T47544; T47544.
DR RefSeq; NP_190855.1; NM_115147.4.
DR AlphaFoldDB; Q9LFA4; -.
DR STRING; 3702.AT3G52870.1; -.
DR iPTMnet; Q9LFA4; -.
DR PaxDb; Q9LFA4; -.
DR PRIDE; Q9LFA4; -.
DR ProteomicsDB; 228829; -.
DR EnsemblPlants; AT3G52870.1; AT3G52870.1; AT3G52870.
DR GeneID; 824453; -.
DR Gramene; AT3G52870.1; AT3G52870.1; AT3G52870.
DR KEGG; ath:AT3G52870; -.
DR Araport; AT3G52870; -.
DR TAIR; locus:2085161; AT3G52870.
DR eggNOG; ENOG502QRIN; Eukaryota.
DR HOGENOM; CLU_026344_1_0_1; -.
DR InParanoid; Q9LFA4; -.
DR OMA; EFYEYIV; -.
DR OrthoDB; 725416at2759; -.
DR PhylomeDB; Q9LFA4; -.
DR PRO; PR:Q9LFA4; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9LFA4; baseline and differential.
DR Genevisible; Q9LFA4; AT.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR InterPro; IPR000048; IQ_motif_EF-hand-BS.
DR InterPro; IPR044159; IQM.
DR PANTHER; PTHR31250; PTHR31250; 1.
DR PROSITE; PS50096; IQ; 1.
PE 2: Evidence at transcript level;
KW Cytoplasm; Nucleus; Reference proteome.
FT CHAIN 1..456
FT /note="IQ domain-containing protein IQM3"
FT /id="PRO_0000433919"
FT DOMAIN 46..75
FT /note="IQ"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00116"
FT REGION 315..358
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 279
FT /note="S -> F (in Ref. 3; AAM78112)"
FT /evidence="ECO:0000305"
FT CONFLICT 296..299
FT /note="LGFL -> FGFF (in Ref. 3; AAM78112)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 456 AA; 51155 MW; B562C67FFCC22569 CRC64;
MQVVSSFDFQ SSPFSHGAGE ILISPVDHRE LSSHGDALEG ACDDSTRLAA VKVQKVYRSY
RTRRRLADSV VVAEELWWQA MDYARLNHST ISFFDYSRPE TAVSRWNRVS LNASKVGKGL
SIVDKAQKLA FQHWIEAIDP RHRYGHNLHK YYEEWCKADA GQPFFYWLDV GGGIDLDLNE
CPRSKLKQQC IRYLGPQERE EYEYVIIEGK IVHKLTGKFL HTMHGSEGTK WIFVMSTFKK
LYAGLKKKGR FHHSSFLAGG ATLAAGRVIV DNGVLKTISA YSGHYRPSDD SLDTFLGFLR
ENAVNLDNVE VHKASEDSDS YDDYVKSNGG SEPEPLKKED TTFQAETETD ENGNGTVGTL
EEAKRSSYQR TLSGGLGSPK ANVPQKSMLL RINSKKQSRS LQLGHQLSLK WSTGVGPRIG
CAADYPVQLR TQALEFVNLS PKYRSSRLSP TGKLDV
